Information for 16-CCGCCCTCTCATA (Motif 28)

A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
Reverse Opposite:
A G C T T C G A C G A T T A C G C G T A A C T G C T G A A C T G A C T G A C T G G T A C C T A G A C T G
p-value:1e-8
log p-value:-1.988e+01
Information Content per bp:1.808
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets58.4 +/- 26.7bp
Average Position of motif in Background36.5 +/- 8.3bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-CCGCCCTCTCATA
TCCGCCCCCGCATT
 A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCGCCCTCTCATA
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

EGR1/MA0162.2/Jaspar

Match Rank:3
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCTCTCATA
CCCCCGCCCCCGCC--
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCCTCTCATA
GCTCCGCCCMCY----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T A C G T A C G T A C G T

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCTCTCATA
GCCCCGCCCCCTCCC-
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C A C G T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CCGCCCTCTCATA
YCCGCCCACGCN--
 A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CCGCCCTCTCATA
GCCCCGCCCCC-----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T A C G T A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----CCGCCCTCTCATA
NAGCCCCGCCCCCN----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T A C G T A C G T A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCGCCCTCTCATA
GCCMCGCCCMCY----
 A C G T A C G T A C G T A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCGCCCTCTCATA
-CRCCCACGCA--
 A G T C A G T C A C T G A G T C A G T C A G T C A G C T A G T C A C G T A G T C G C T A A G C T C T G A
A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T