Information for 22-TCTGCGCCGG (Motif 29)

A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G A C T G A G T C A C T G A G T C C G T A A C T G C G T A
p-value:1e-5
log p-value:-1.292e+01
Information Content per bp:1.530
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif10.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.0 +/- 27.2bp
Average Position of motif in Background59.9 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCTGCGCCGG---
-CTGCGCATGCGC
 A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCTGCGCCGG---
--TGCGCAGGCGC
 A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0112.1_E2F2_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCGCCGG---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TCTGCGCCGG
---GCTCCG-
 A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCGCCGG-
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCGCCGG---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCTGCGCCGG
NNGCNCTGCGCGGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----TCTGCGCCGG
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCTGCGCCGG-
-CTGTTCCTGG
 A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G A C G T
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTGCGCCGG
AGCGCGCC--
 A C G T A G T C A C G T A C T G A G T C A C T G A G T C A G T C A C T G A C T G
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T