Information for 2-NVCCACGTGC (Motif 2)

A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
Reverse Opposite:
A T C G A G T C G T C A A T G C C T A G G A C T C A T G A T C G A G C T T G C A
p-value:1e-93
log p-value:-2.160e+02
Information Content per bp:1.650
Number of Target Sequences with motif213.0
Percentage of Target Sequences with motif23.25%
Number of Background Sequences with motif1848.1
Percentage of Background Sequences with motif4.11%
Average Position of motif in Targets50.8 +/- 20.9bp
Average Position of motif in Background50.9 +/- 36.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MNT/MA0825.1/Jaspar

Match Rank:1
Score:0.97
Offset:1
Orientation:forward strand
Alignment:NVCCACGTGC-
-ACCACGTGCC
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C A C G T
A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NVCCACGTGC
-NCCACGTG-
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T

MAX/MA0058.3/Jaspar

Match Rank:3
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NVCCACGTGC-
-ACCACGTGCT
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C A C G T
A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:forward strand
Alignment:NVCCACGTGC
NNCCACGTGG
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NVCCACGTGC
-NVCACGTG-
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T

Mycn/MA0104.3/Jaspar

Match Rank:6
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NVCCACGTGC
-GCCACGTG-
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
A C G T C T A G A T G C A G T C C G T A A G T C C T A G A C G T A C T G A C G T

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NVCCACGTGC
NNCCACGTGG
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G

Mlxip/MA0622.1/Jaspar

Match Rank:8
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NVCCACGTGC
--ACACGTGC
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
A C G T A C G T G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C

Id2/MA0617.1/Jaspar

Match Rank:9
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NVCCACGTGC
--TCACGTGC
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C
A C G T A C G T G A C T A G T C C G T A A G T C A C T G A C G T A C T G A G T C

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.94
Offset:1
Orientation:forward strand
Alignment:NVCCACGTGC---
-ACCACGTGGTNN
 A C G T T C G A T A G C G T A C C T G A G A T C T A C G C A G T A C T G T A G C A C G T A C G T A C G T
A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T