Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-60 | -1.403e+02 | 0.0000 | 79.0 | 10.22% | 353.2 | 0.74% | motif file (matrix) |
svg |
2 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-56 | -1.305e+02 | 0.0000 | 236.0 | 30.53% | 4664.0 | 9.84% | motif file (matrix) |
svg |
3 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-45 | -1.036e+02 | 0.0000 | 204.0 | 26.39% | 4218.0 | 8.90% | motif file (matrix) |
svg |
4 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-43 | -1.008e+02 | 0.0000 | 142.0 | 18.37% | 2192.4 | 4.62% | motif file (matrix) |
svg |
5 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-43 | -1.005e+02 | 0.0000 | 203.0 | 26.26% | 4269.5 | 9.00% | motif file (matrix) |
svg |
6 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-31 | -7.220e+01 | 0.0000 | 110.0 | 14.23% | 1799.4 | 3.80% | motif file (matrix) |
svg |
7 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-30 | -6.929e+01 | 0.0000 | 134.0 | 17.34% | 2662.7 | 5.62% | motif file (matrix) |
svg |
8 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-25 | -5.905e+01 | 0.0000 | 102.0 | 13.20% | 1846.4 | 3.89% | motif file (matrix) |
svg |
9 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-25 | -5.854e+01 | 0.0000 | 110.0 | 14.23% | 2126.8 | 4.49% | motif file (matrix) |
svg |
10 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-25 | -5.827e+01 | 0.0000 | 83.0 | 10.74% | 1273.1 | 2.68% | motif file (matrix) |
svg |
11 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-21 | -4.966e+01 | 0.0000 | 100.0 | 12.94% | 2028.1 | 4.28% | motif file (matrix) |
svg |
12 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-19 | -4.527e+01 | 0.0000 | 87.0 | 11.25% | 1704.9 | 3.60% | motif file (matrix) |
svg |
13 |
| Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-18 | -4.350e+01 | 0.0000 | 306.0 | 39.59% | 11773.6 | 24.83% | motif file (matrix) |
svg |
14 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-18 | -4.327e+01 | 0.0000 | 69.0 | 8.93% | 1168.1 | 2.46% | motif file (matrix) |
svg |
15 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-17 | -4.030e+01 | 0.0000 | 68.0 | 8.80% | 1206.9 | 2.55% | motif file (matrix) |
svg |
16 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-15 | -3.488e+01 | 0.0000 | 33.0 | 4.27% | 334.6 | 0.71% | motif file (matrix) |
svg |
17 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-15 | -3.469e+01 | 0.0000 | 79.0 | 10.22% | 1741.0 | 3.67% | motif file (matrix) |
svg |
18 |
| Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer | 1e-14 | -3.288e+01 | 0.0000 | 207.0 | 26.78% | 7490.0 | 15.80% | motif file (matrix) |
svg |
19 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-13 | -3.190e+01 | 0.0000 | 57.0 | 7.37% | 1061.1 | 2.24% | motif file (matrix) |
svg |
20 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-13 | -3.043e+01 | 0.0000 | 38.0 | 4.92% | 522.1 | 1.10% | motif file (matrix) |
svg |
21 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-12 | -2.843e+01 | 0.0000 | 47.0 | 6.08% | 827.3 | 1.74% | motif file (matrix) |
svg |
22 |
| Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer | 1e-11 | -2.634e+01 | 0.0000 | 49.0 | 6.34% | 945.2 | 1.99% | motif file (matrix) |
svg |
23 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-11 | -2.614e+01 | 0.0000 | 50.0 | 6.47% | 984.2 | 2.08% | motif file (matrix) |
svg |
24 |
| Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer | 1e-11 | -2.571e+01 | 0.0000 | 96.0 | 12.42% | 2783.0 | 5.87% | motif file (matrix) |
svg |
25 |
| Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer | 1e-10 | -2.529e+01 | 0.0000 | 39.0 | 5.05% | 652.4 | 1.38% | motif file (matrix) |
svg |
26 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-10 | -2.384e+01 | 0.0000 | 54.0 | 6.99% | 1194.6 | 2.52% | motif file (matrix) |
svg |
27 |
| Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer | 1e-10 | -2.370e+01 | 0.0000 | 100.0 | 12.94% | 3063.2 | 6.46% | motif file (matrix) |
svg |
28 |
| Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer | 1e-9 | -2.253e+01 | 0.0000 | 135.0 | 17.46% | 4745.9 | 10.01% | motif file (matrix) |
svg |
29 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-9 | -2.162e+01 | 0.0000 | 52.0 | 6.73% | 1197.1 | 2.52% | motif file (matrix) |
svg |
30 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -2.032e+01 | 0.0000 | 56.0 | 7.24% | 1397.5 | 2.95% | motif file (matrix) |
svg |
31 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-8 | -2.029e+01 | 0.0000 | 45.0 | 5.82% | 988.1 | 2.08% | motif file (matrix) |
svg |
32 |
| Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer | 1e-7 | -1.797e+01 | 0.0000 | 138.0 | 17.85% | 5254.4 | 11.08% | motif file (matrix) |
svg |
33 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-7 | -1.675e+01 | 0.0000 | 29.0 | 3.75% | 544.8 | 1.15% | motif file (matrix) |
svg |
34 |
| Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer | 1e-7 | -1.659e+01 | 0.0000 | 46.0 | 5.95% | 1161.9 | 2.45% | motif file (matrix) |
svg |
35 |
| Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer | 1e-6 | -1.607e+01 | 0.0000 | 41.0 | 5.30% | 990.2 | 2.09% | motif file (matrix) |
svg |
36 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-6 | -1.526e+01 | 0.0000 | 80.0 | 10.35% | 2686.6 | 5.67% | motif file (matrix) |
svg |
37 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-6 | -1.473e+01 | 0.0000 | 104.0 | 13.45% | 3861.2 | 8.14% | motif file (matrix) |
svg |
38 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-6 | -1.404e+01 | 0.0000 | 62.0 | 8.02% | 1955.1 | 4.12% | motif file (matrix) |
svg |
39 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-6 | -1.400e+01 | 0.0000 | 5.0 | 0.65% | 10.5 | 0.02% | motif file (matrix) |
svg |
40 |
| Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer | 1e-5 | -1.368e+01 | 0.0000 | 22.0 | 2.85% | 397.6 | 0.84% | motif file (matrix) |
svg |
41 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.340e+01 | 0.0000 | 69.0 | 8.93% | 2310.4 | 4.87% | motif file (matrix) |
svg |
42 |
| EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer | 1e-5 | -1.333e+01 | 0.0000 | 47.0 | 6.08% | 1350.1 | 2.85% | motif file (matrix) |
svg |
43 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.319e+01 | 0.0000 | 29.0 | 3.75% | 650.9 | 1.37% | motif file (matrix) |
svg |
44 |
| Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer | 1e-5 | -1.297e+01 | 0.0000 | 91.0 | 11.77% | 3379.7 | 7.13% | motif file (matrix) |
svg |
45 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-5 | -1.293e+01 | 0.0000 | 66.0 | 8.54% | 2205.4 | 4.65% | motif file (matrix) |
svg |
46 |
| Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer | 1e-5 | -1.275e+01 | 0.0000 | 29.0 | 3.75% | 665.4 | 1.40% | motif file (matrix) |
svg |
47 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-5 | -1.206e+01 | 0.0000 | 19.0 | 2.46% | 342.1 | 0.72% | motif file (matrix) |
svg |
48 |
| ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer | 1e-5 | -1.187e+01 | 0.0001 | 84.0 | 10.87% | 3133.5 | 6.61% | motif file (matrix) |
svg |
49 |
| MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer | 1e-5 | -1.166e+01 | 0.0001 | 50.0 | 6.47% | 1571.5 | 3.31% | motif file (matrix) |
svg |
50 |
| KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer | 1e-4 | -1.104e+01 | 0.0001 | 33.0 | 4.27% | 887.4 | 1.87% | motif file (matrix) |
svg |
51 |
| Sp1(Zf)/Promoter/Homer | 1e-4 | -1.101e+01 | 0.0001 | 26.0 | 3.36% | 617.0 | 1.30% | motif file (matrix) |
svg |
52 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-4 | -1.100e+01 | 0.0001 | 37.0 | 4.79% | 1052.7 | 2.22% | motif file (matrix) |
svg |
53 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-4 | -1.003e+01 | 0.0003 | 58.0 | 7.50% | 2045.0 | 4.31% | motif file (matrix) |
svg |
54 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-4 | -9.960e+00 | 0.0003 | 12.0 | 1.55% | 177.2 | 0.37% | motif file (matrix) |
svg |
55 |
| EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer | 1e-4 | -9.923e+00 | 0.0003 | 51.0 | 6.60% | 1728.4 | 3.65% | motif file (matrix) |
svg |
56 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-4 | -9.366e+00 | 0.0006 | 11.0 | 1.42% | 160.3 | 0.34% | motif file (matrix) |
svg |
57 |
| Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer | 1e-4 | -9.326e+00 | 0.0006 | 118.0 | 15.27% | 5124.1 | 10.81% | motif file (matrix) |
svg |
58 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -9.187e+00 | 0.0006 | 25.0 | 3.23% | 651.7 | 1.37% | motif file (matrix) |
svg |
59 |
| ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer | 1e-3 | -8.957e+00 | 0.0008 | 47.0 | 6.08% | 1613.6 | 3.40% | motif file (matrix) |
svg |
60 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.938e+00 | 0.0008 | 39.0 | 5.05% | 1253.8 | 2.64% | motif file (matrix) |
svg |
61 |
| RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer | 1e-3 | -8.653e+00 | 0.0010 | 42.0 | 5.43% | 1406.5 | 2.97% | motif file (matrix) |
svg |
62 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -8.533e+00 | 0.0012 | 95.0 | 12.29% | 4020.3 | 8.48% | motif file (matrix) |
svg |
63 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.751e+00 | 0.0025 | 73.0 | 9.44% | 2982.9 | 6.29% | motif file (matrix) |
svg |
64 |
| MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer | 1e-3 | -7.711e+00 | 0.0025 | 96.0 | 12.42% | 4173.5 | 8.80% | motif file (matrix) |
svg |
65 |
| Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-3 | -7.638e+00 | 0.0027 | 112.0 | 14.49% | 5030.9 | 10.61% | motif file (matrix) |
svg |
66 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-3 | -7.088e+00 | 0.0046 | 55.0 | 7.12% | 2150.2 | 4.53% | motif file (matrix) |
svg |
67 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-3 | -7.066e+00 | 0.0046 | 47.0 | 6.08% | 1762.4 | 3.72% | motif file (matrix) |
svg |
68 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-2 | -6.892e+00 | 0.0054 | 238.0 | 30.79% | 12227.0 | 25.79% | motif file (matrix) |
svg |
69 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -6.884e+00 | 0.0054 | 53.0 | 6.86% | 2071.0 | 4.37% | motif file (matrix) |
svg |
70 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.745e+00 | 0.0061 | 77.0 | 9.96% | 3303.4 | 6.97% | motif file (matrix) |
svg |
71 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-2 | -6.488e+00 | 0.0078 | 6.0 | 0.78% | 74.7 | 0.16% | motif file (matrix) |
svg |
72 |
| GFY-Staf(?,Zf)/Promoter/Homer | 1e-2 | -6.151e+00 | 0.0108 | 7.0 | 0.91% | 108.0 | 0.23% | motif file (matrix) |
svg |
73 |
| ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer | 1e-2 | -6.141e+00 | 0.0108 | 42.0 | 5.43% | 1602.3 | 3.38% | motif file (matrix) |
svg |
74 |
| RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer | 1e-2 | -6.137e+00 | 0.0108 | 35.0 | 4.53% | 1267.0 | 2.67% | motif file (matrix) |
svg |
75 |
| RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer | 1e-2 | -6.068e+00 | 0.0112 | 50.0 | 6.47% | 2003.1 | 4.22% | motif file (matrix) |
svg |
76 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -6.032e+00 | 0.0115 | 230.0 | 29.75% | 11955.9 | 25.22% | motif file (matrix) |
svg |
77 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -5.996e+00 | 0.0118 | 11.0 | 1.42% | 242.4 | 0.51% | motif file (matrix) |
svg |
78 |
| PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer | 1e-2 | -5.778e+00 | 0.0144 | 14.0 | 1.81% | 363.8 | 0.77% | motif file (matrix) |
svg |
79 |
| KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer | 1e-2 | -5.561e+00 | 0.0177 | 52.0 | 6.73% | 2158.5 | 4.55% | motif file (matrix) |
svg |
80 |
| Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer | 1e-2 | -5.560e+00 | 0.0177 | 132.0 | 17.08% | 6463.7 | 13.63% | motif file (matrix) |
svg |
81 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-2 | -5.559e+00 | 0.0177 | 19.0 | 2.46% | 580.7 | 1.22% | motif file (matrix) |
svg |
82 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-2 | -5.557e+00 | 0.0177 | 44.0 | 5.69% | 1756.4 | 3.70% | motif file (matrix) |
svg |
83 |
| PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer | 1e-2 | -5.397e+00 | 0.0199 | 18.0 | 2.33% | 546.3 | 1.15% | motif file (matrix) |
svg |
84 |
| GFY(?)/Promoter/Homer | 1e-2 | -5.020e+00 | 0.0286 | 8.0 | 1.03% | 166.2 | 0.35% | motif file (matrix) |
svg |
85 |
| AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer | 1e-2 | -4.986e+00 | 0.0293 | 78.0 | 10.09% | 3598.1 | 7.59% | motif file (matrix) |
svg |
86 |
| HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer | 1e-2 | -4.815e+00 | 0.0343 | 44.0 | 5.69% | 1835.5 | 3.87% | motif file (matrix) |
svg |
87 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-2 | -4.746e+00 | 0.0363 | 59.0 | 7.63% | 2621.0 | 5.53% | motif file (matrix) |
svg |
88 |
| Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer | 1e-2 | -4.687e+00 | 0.0381 | 5.0 | 0.65% | 77.4 | 0.16% | motif file (matrix) |
svg |
89 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -4.652e+00 | 0.0390 | 12.0 | 1.55% | 332.3 | 0.70% | motif file (matrix) |
svg |