Information for 6-CCCAGTGGGG (Motif 7)

G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G
Reverse Opposite:
A G T C T A G C G T A C A G T C T G C A A T G C G A C T A C T G A C T G C A T G
p-value:1e-17
log p-value:-3.993e+01
Information Content per bp:1.689
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.89%
Number of Background Sequences with motif997.3
Percentage of Background Sequences with motif2.10%
Average Position of motif in Targets54.1 +/- 24.0bp
Average Position of motif in Background50.5 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0101.1_Zic1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---CCCAGTGGGG-
CACCCCCGGGGGGG
 A C G T A C G T A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CCCAGTGGGG-
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CCCAGTGGGG
GTCCCCAGGGGA-
 A C G T A C G T A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGTGGGG----
DCHCAGCAGGRGGCC
 A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0103.1_Zic3_1/Jaspar

Match Rank:5
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CCCAGTGGGG-
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGTGGGG----
NCNCAGCGGGGGGTC
 A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T A C G T A C G T A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGTGGGG----
NCGCAGCGGGGGGTC
 A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T A C G T A C G T A C G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCCAGTGGGG----
CACAGCGGGGGGTC
 G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T A C G T A C G T A C G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-CCCAGTGGGG
DCTCAGCAGG-
 A C G T G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCCAGTGGGG--
CACAGCAGGGGG
 G T A C T G A C A G T C C T G A T A C G A C G T C T A G C A T G A T C G T C A G A C G T A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G