p-value: | 1e-8 |
log p-value: | -1.937e+01 |
Information Content per bp: | 1.856 |
Number of Target Sequences with motif | 12.0 |
Percentage of Target Sequences with motif | 1.55% |
Number of Background Sequences with motif | 71.9 |
Percentage of Background Sequences with motif | 0.15% |
Average Position of motif in Targets | 58.6 +/- 28.8bp |
Average Position of motif in Background | 48.3 +/- 27.6bp |
Strand Bias (log2 ratio + to - strand density) | 0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer
Match Rank: | 1 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AAAGGGCTCT ACAAAGGNBCCT |
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Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer
Match Rank: | 2 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----AAAGGGCTCT ANGNAAAGGTCA-- |
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PB0053.1_Rara_1/Jaspar
Match Rank: | 3 |
Score: | 0.60 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAAGGGCTCT-- TCTCAAAGGTCACCTG |
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PB0049.1_Nr2f2_1/Jaspar
Match Rank: | 4 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----AAAGGGCTCT-- TCTCAAAGGTCACGAG |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 5 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAGGGCTCT --AGGCCTNG |
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PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAGGGCTCT---- --AGGTCTCTAACC |
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Sox2/MA0143.3/Jaspar
Match Rank: | 7 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAAGGGCTCT AACAAAGG----- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AAAGGGCTCT RACAAWGG----- |
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POL010.1_DCE_S_III/Jaspar
Match Rank: | 9 |
Score: | 0.57 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | AAAGGGCTCT ----NGCTN- |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | AAAGGGCTCT --AGGCCTAG |
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