Information for 18-AKGGGATTAG (Motif 23)

T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G
Reverse Opposite:
A G T C C G A T G T C A C G T A A C G T G T A C G T A C A G T C G T A C A C G T
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.791
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.29%
Number of Background Sequences with motif35.8
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets61.2 +/- 16.7bp
Average Position of motif in Background49.8 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Crx/MA0467.1/Jaspar

Match Rank:1
Score:0.88
Offset:-1
Orientation:forward strand
Alignment:-AKGGGATTAG
AAGAGGATTAG
 A C G T T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

GSC2/MA0891.1/Jaspar

Match Rank:2
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:AKGGGATTAG-
-GNGGATTAGN
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:AKGGGATTAG-
-NNGGATTAGN
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:4
Score:0.84
Offset:2
Orientation:forward strand
Alignment:AKGGGATTAG
--RGGATTAR
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

PITX3/MA0714.1/Jaspar

Match Rank:5
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:AKGGGATTAG-
--GGGATTANN
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:6
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:AKGGGATTAG-
---GGATTAGC
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:7
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:AKGGGATTAG-
-VRGGATTARN
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G A C G T
A C G T T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C

Pitx1/MA0682.1/Jaspar

Match Rank:8
Score:0.82
Offset:2
Orientation:reverse strand
Alignment:AKGGGATTAG
--GGGATTAA
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G
A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A

PH0139.1_Pitx3/Jaspar

Match Rank:9
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-AKGGGATTAG-----
AGGGGGATTAGCTGCC
 A C G T T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:10
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:AKGGGATTAG
-NGGGATTA-
 T G C A A C T G C T A G A C T G C A T G C G T A A C G T A C G T C G T A A C T G
A C G T T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T