Information for 2-ATTGAAATGC (Motif 2)

G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C
Reverse Opposite:
A C T G G A T C G T C A A G C T A C G T G A C T T A G C G C T A C G T A C G A T
p-value:1e-24
log p-value:-5.696e+01
Information Content per bp:1.535
Number of Target Sequences with motif218.0
Percentage of Target Sequences with motif28.20%
Number of Background Sequences with motif6559.8
Percentage of Background Sequences with motif13.84%
Average Position of motif in Targets50.7 +/- 26.7bp
Average Position of motif in Background50.1 +/- 32.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-ATTGAAATGC
NATTCAAAT--
 A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C
C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----ATTGAAATGC--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-ATTGAAATGC----
CTTTGTTATGCAAAT
 A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C A C G T A C G T A C G T A C G T
A G T C G C A T A G C T C A G T T A C G C G A T G A C T G C T A C G A T A C T G A G T C C G T A C T G A C T G A C A G T

OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTGAAATGC----
CATTGTTATGCAAAT
 A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C A C G T A C G T A C G T A C G T
G A T C G C T A G A C T C G A T A T C G C G A T G A C T C G T A C G A T C A T G A G T C C G T A C T G A C G T A C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTGAAATGC
CGGTTTCAAA---
 A C G T A C G T A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---ATTGAAATGC--
TTGAATGAAATTCGA
 A C G T A C G T A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

TEAD3/MA0808.1/Jaspar

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATTGAAATGC
--TGGAATGT
 G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C
A C G T A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ATTGAAATGC
NCTGGAATGC
 G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C

POU5F1B/MA0792.1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATTGAAATGC
TATGCAAAT--
 A C G T G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:ATTGAAATGC-
-NTGGAATGTG
 G C T A G C A T C G A T A T C G C T G A T G C A T C G A C A G T C T A G T G A C A C G T
A C G T C T G A G C A T T C A G C A T G C G T A T C G A C A G T A C T G A G C T C T A G