Information for 7-CAGCCAATCAGCG (Motif 14)

A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
Reverse Opposite:
A G T C A T C G A T G C A C G T A C T G C G T A A C G T A C G T A C T G T C A G A G T C C G A T A T C G
p-value:1e-12
log p-value:-2.825e+01
Information Content per bp:1.794
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif24.1
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets43.8 +/- 24.4bp
Average Position of motif in Background62.2 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CAGCCAATCAGCG
AAATGGACCAATCAG--
 A C G T A C G T A C G T A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CAGCCAATCAGCG----
TGGACCAATCAGCACTCT
 A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAATCAGCG
SCTGTCAVTCAV--
 A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CAGCCAATCAGCG
-AGCCAATCGG--
 A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAATCAGCG
ACTAGCCAATCA---
 A C G T A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAATCAGCG
NCTGTCAATCAN--
 A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:7
Score:0.67
Offset:3
Orientation:forward strand
Alignment:CAGCCAATCAGCG
---CCAATCAA--
 A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGCCAATCAGCG
GSCTGTCACTCA---
 A C G T A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CAGCCAATCAGCG---
CGACCCAATCAACGGTG
 A C G T A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CAGCCAATCAGCG
---CAAATCACTG
 A T G C G C T A A C T G A G T C A G T C G T C A T C G A G C A T A G T C C G T A A T C G A T G C C T A G
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G