Information for 6-GTGAGTTAAAAGA (Motif 11)

A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A
Reverse Opposite:
A C G T A G T C A C G T C A G T C G A T A C G T C T G A C G T A A T G C A G C T T A G C G C T A A T G C
p-value:1e-14
log p-value:-3.282e+01
Information Content per bp:1.767
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif29.1
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.5 +/- 25.3bp
Average Position of motif in Background56.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GTGAGTTAAAAGA
---ACATCAAAGG
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

TCF7L2/MA0523.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTGAGTTAAAAGA--
-AAAGATCAAAGGAA
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PB0109.1_Bbx_2/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GTGAGTTAAAAGA---
TGATTGTTAACAGTTGG
 A C G T A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GTGAGTTAAAAGA--
---ACATCAAAGGNA
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:5
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GTGAGTTAAAAGA
---ACWTCAAAGG
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GTGAGTTAAAAGA----
TATAGATCAAAGGAAAA
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T A C G T A C G T A C G T
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0081.1_Tcf1_1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGAGTTAAAAGA--
NNNTTAGTTAACTNANN
 A C G T A C G T A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T A C G T
G A C T C A G T G A C T A G C T G A C T C T G A T A C G G A C T C G A T C G T A C G T A A G T C A G C T C T G A T C G A C T A G A C G T

PB0040.1_Lef1_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGAGTTAAAAGA----
NANAGATCAAAGGGNNN
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T A C G T A C G T A C G T
A C T G G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C A G G C T A G A C T G A C T

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GTGAGTTAAAAGA-
ANNNCTAGTTAACNGNN
 A C G T A C G T A C G T A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTGAGTTAAAAGA
-TATGTAAACANG
 A T C G C A G T A T C G C T G A T A C G A C G T A G C T T C G A C G T A G C T A C G T A T A C G T C G A
A C G T G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G