Information for 13-TGACTGTTTGAAT (Motif 9)

A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T A G T C C G T A G T C A C G T A T A G C G T C A C T A G C G A T A G T C C G T A
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.913
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets55.1 +/- 20.5bp
Average Position of motif in Background37.6 +/- 22.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

LIN54/MA0619.1/Jaspar

Match Rank:1
Score:0.70
Offset:5
Orientation:forward strand
Alignment:TGACTGTTTGAAT-
-----ATTTGAATT
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:TGACTGTTTGAAT---
------TTTGAAACCG
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G

PB0170.1_Sox17_2/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGACTGTTTGAAT------
--NTTNTATGAATGTGNNC
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

Foxd3/MA0041.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:TGACTGTTTGAAT
-GAATGTTTGTTT
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGACTGTTTGAAT-----
--NNNTATTGAATTGNNN
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

Myb/MA0100.2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TGACTGTTTGAAT
TGGCAGTTGN---
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T
C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G A C G T A C G T A C G T

Rarg/MA0859.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTTTGAAT--
TTGACCTTTTGACCTT
 A C G T A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T A C G T A C G T
C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-TGACTGTTTGAAT
TTGACTTTT-----
 A C G T A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T
C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGACTGTTTGAAT
TGGCAGTTGG---
 A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T
G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:10
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGACTGTTTGAAT
NNNNTAACGGTTNNNAN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G A T C A C G T A C T G A C G T A C G T A C G T A C T G C T G A C G T A A C G T
G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T