Information for 4-TTGTBAAARAGAATRA (Motif 6)

C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A
Reverse Opposite:
G C A T G A T C C G T A A C G T A C G T A T G C C G A T A G C T A C G T C G A T C G A T T A C G C G T A A G T C C G T A G C T A
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.659
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets49.8 +/- 24.3bp
Average Position of motif in Background68.0 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0062.1_Sox12_1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGTBAAARAGAATRA
--NTTNAGAACAATTA
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A
A C G T A C G T C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTGTBAAARAGAATRA
BAGTCATANTGAAAG-
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A
A C T G C G T A A T C G C G A T T G A C C G T A C G A T G C T A G T C A C G A T T C A G C T G A C T G A C T G A T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:TTGTBAAARAGAATRA
------AAAACAATGG
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:TTGTBAAARAGAATRA-
-------RAACAATGGN
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

PB0073.1_Sox7_1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TTGTBAAARAGAATRA-------
-AATAAAGAACAATAGAATTTCA
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0182.1_Srf_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTGTBAAARAGAATRA---
--GTTAAAAAAAAAAATTA
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T

PB0074.1_Sox8_1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTGTBAAARAGAATRA----
---TNNAGAACAATANATNN
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T G C T A G T C A C G T A C A T G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C A T G T C A G T A C

PB0093.1_Zfp105_1/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TTGTBAAARAGAATRA
-AACAAACAACAAGAG
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A
A C G T G C T A C G T A G A T C G T C A C G T A G C T A G A T C C T G A C G T A G T A C C T G A G C T A C A T G C G T A C T A G

PB0067.1_Sox18_1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TTGTBAAARAGAATRA--
--NNTNANAACAATTNNA
 C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A A C G T A C G T
A C G T A C G T C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGTBAAARAGAATRA-
WNAGTCADAVTGAAACTN
 A C G T C G A T C G A T T C A G C G A T A T G C C G T A G C T A G T C A C T G A C G T A T A C G G T C A G T C A C G A T C T A G C G T A A C G T
G C A T T A C G C G T A A T C G G C A T T A G C G C T A C G T A G C T A T G C A C G A T T C A G C T G A T C G A T C G A T A G C G A C T T C A G