Information for 19-CTSCTTYATTTGC (Motif 17)

A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C
Reverse Opposite:
A T C G A G T C C G T A C T G A C G T A A C G T C T G A C G T A C T G A A C T G A T C G C G T A C T A G
p-value:1e-10
log p-value:-2.306e+01
Information Content per bp:1.850
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 25.8bp
Average Position of motif in Background33.8 +/- 23.2bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU2F2/MA0507.1/Jaspar

Match Rank:1
Score:0.64
Offset:4
Orientation:forward strand
Alignment:CTSCTTYATTTGC----
----TTCATTTGCATAT
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTSCTTYATTTGC---
----CTCATTTGCATW
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T T G A C G T C A A C G T A G C T C G A T T C A G T G A C G C T A G C A T C G T A

PH0144.1_Pou2f2/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTSCTTYATTTGC------
---TNTAATTTGCATANNN
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:CTSCTTYATTTGC----
-------ATTTGCATAT
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:CTSCTTYATTTGC----
-------ATTTGCATAA
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTSCTTYATTTGC------
---TNTAATTTGCATACNA
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CTSCTTYATTTGC------
---TNTAATTTGCATACNA
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

Hmx1/MA0896.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTSCTTYATTTGC----
ANNCATTAATTGCTNGN
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTSCTTYATTTGC----
ANNCATTAATTGCTNGN
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T
T G C A G C A T A C G T A T G C G C T A G C A T G C A T C T G A C G T A C A G T G A C T C T A G A G T C G A C T A C G T A T C G A C G T

POU1F1/MA0784.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTSCTTYATTTGC-----
----CTAATTTGCATATT
 A G T C A C G T A T G C A G T C A G C T C G A T A G C T C G T A A C G T A G C T A C G T A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G C A T T G C A G C T A C A G T G C A T C G A T T C A G G T A C C T G A G A C T G C T A G C A T G C A T