Information for 3-TGGGARTTGTAGT (Motif 4)

G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
Reverse Opposite:
C T G A A T G C A G C T G T C A A G T C G C T A T G C A A G T C C G A T A G T C A G T C A G T C C G T A
p-value:1e-16
log p-value:-3.767e+01
Information Content per bp:1.785
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.42%
Number of Background Sequences with motif204.0
Percentage of Background Sequences with motif0.43%
Average Position of motif in Targets44.7 +/- 25.8bp
Average Position of motif in Background44.9 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:TGGGARTTGTAGT
-GGGAATTGTAGT
 G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
A C G T C A T G T C A G T C A G T C G A T C G A G C A T A C G T A C T G A C G T C T G A A T C G A C G T

Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer

Match Rank:2
Score:0.89
Offset:-6
Orientation:reverse strand
Alignment:------TGGGARTTGTAGT-
GCMTBCTGGGAGTTGTAGTY
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T A C G T
C A T G T A G C G T A C A G C T A C G T T G A C A G C T C T A G A C T G C T A G C G T A T C A G G C A T A G C T A C T G C G A T C T G A A C T G A C G T A G T C

GFY-Staf(?,Zf)/Promoter/Homer

Match Rank:3
Score:0.86
Offset:-6
Orientation:reverse strand
Alignment:------TGGGARTTGTAGT-
GCATTCTGGGAATTGTAGTT
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T A C G T
T C A G T A G C G T C A A G C T A C G T A G T C A G C T A C T G A C T G C T A G C G T A C T G A C G A T A G C T A C T G A C G T C T G A A C T G A C G T A G C T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TGGGARTTGTAGT
CSTGGGAAAD-----
 A C G T A C G T G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------TGGGARTTGTAGT
RGSMTBCTGGGAAAT-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

SP8/MA0747.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGARTTGTAGT
AGTGGGCGTGGC---
 A C G T A C G T G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
C T G A T C A G A C G T T C A G A T C G A T C G T G A C C A T G C A G T C A T G C A T G A G T C A C G T A C G T A C G T

SP3/MA0746.1/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGGARTTGTAGT
GGGGGCGTGGN---
 A C G T G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
C T A G C A T G T C A G C A T G C A T G G A T C C T A G A C G T C A T G C A T G A T G C A C G T A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TGGGARTTGTAGT
TGGGTGTGGCN--
 G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGGGARTTGTAGT
-TGGAACAGMA--
 G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGGGARTTGTAGT
TGGGTGTGGC---
 G C A T A C T G A C T G A C T G G C T A T C A G A C G T C A G T C T A G A C G T C T G A A T C G A G C T
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T A C G T A C G T