Information for 5-TCACACGAYCCTGACC (Motif 12)

A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
Reverse Opposite:
A C T G A T C G A C G T A T G C T G C A C T A G C T A G T C G A G A C T A T G C T A C G A C G T A T C G A G C T C T A G C T G A
p-value:1e-8
log p-value:-1.928e+01
Information Content per bp:1.725
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 17.8bp
Average Position of motif in Background39.6 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:1
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-TCACACGAYCCTGACC
GTCACATGAY-------
 A C G T A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCACACGAYCCTGACC-
-----TGACCTTGACCT
 A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:3
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TCACACGAYCCTGACC-
-----TGACCTTGACCT
 A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:4
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TCACACGAYCCTGACC
ATTTCCCAGVAKSCY----
 A C G T A C G T A C G T A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C A C G T A C G T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:TCACACGAYCCTGACC
TCACACCT--------
 A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--TCACACGAYCCTGACC
GGTCACATGAC-------
 A C G T A C G T A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TCACACGAYCCTGACC
NNTTTGCACACGGCCC-----
 A C G T A C G T A C G T A C G T A C G T A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TCACACGAYCCTGACC
NTTTTCACACCTT-------
 A C G T A C G T A C G T A C G T A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX1/MA0805.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TCACACGAYCCTGACC
TCACACCT--------
 A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCACACGAYCCTGACC
TTCACACCTT-------
 A C G T A G C T A G T C T C G A A T G C C G T A A T G C A T C G C T G A A G C T A G T C A G T C A C G T A T C G G T C A A T G C G T A C
C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T