Information for 10-CCACAACTCA (Motif 37)

A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
Reverse Opposite:
A C G T A C T G C G T A C T A G A C G T A C G T C T A G A G C T C T A G A C T G
p-value:1e-6
log p-value:-1.537e+01
Information Content per bp:1.873
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.21%
Number of Background Sequences with motif55.0
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets51.1 +/- 23.9bp
Average Position of motif in Background45.7 +/- 23.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCACAACTCA
GGCCATAAATCA
 A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCACAACTCA-
GGCCATAAATCAC
 A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CCACAACTCA
GCCATAAATCA
 A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACAACTCA
GGCCATAAATCA
 A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACAACTCA
NWAACCACADNN--
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CCACAACTCA-
--AAAAGTCAA
 A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A A C G T
A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

PB0122.1_Foxk1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCACAACTCA-
CAAACAACAACACCT
 A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A A C G T
G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCACAACTCA
AAACCACANN---
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCACAACTCA
AAACCGCAAA---
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCACAACTCA
AAACCGCAA----
 A C G T A C G T A C G T A G T C A G T C C T G A A G T C C G T A C G T A A G T C A C G T G T A C C G T A
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T