Information for 6-CTTTTAGGCC (Motif 32)

T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C
Reverse Opposite:
C A T G T C A G T A G C G A T C G A C T C G T A C G T A T C G A C T G A A T C G
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.689
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.37%
Number of Background Sequences with motif923.8
Percentage of Background Sequences with motif1.88%
Average Position of motif in Targets59.4 +/- 24.7bp
Average Position of motif in Background50.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0065.1_Hoxc10/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGGCC----
ANNTTTTACGACNTNN
 A C G T A C G T T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T A C G T A C G T A C G T
T G C A T A G C C T A G G C A T C A G T C G A T C G A T C G T A A G T C A C T G C T G A A G T C G A C T G C A T G C A T C G T A

PH0066.1_Hoxc11/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGGCC----
NNNTTTTACGACNTTN
 A C G T A C G T T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T A C G T A C G T A C G T
G T A C G A C T C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C T G A

CDX2/MA0465.1/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CTTTTAGGCC--
-TTTTATGGCTN
 T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T A C G T
A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTTTAGGCC----
NNGTTTTACGACTTTA
 A C G T A C G T T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T A C G T A C G T A C G T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CTTTTAGGCC-
---CTAGGCCT
 T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T
A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-CTTTTAGGCC-
CCTTTTATAGNC
 A C G T T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T
A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTTTAGGCC-
NTTTTACGACC
 T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C

PH0076.1_Hoxd11/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CTTTTAGGCC----
ANNATTTTACGACNTNA
 A C G T A C G T A C G T T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T A C G T A C G T A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTTTAGGCC
NTTTTATGAC
 T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C
C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C

HOXC11/MA0651.1/Jaspar

Match Rank:10
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTTTAGGCC-
NTTTTACGACC
 T A G C A G C T A G C T G C A T G C A T C T G A C T A G A T C G A G T C G T A C A C G T
C G T A C G A T C A G T C G A T G C A T C G T A A G T C C T A G C T G A A G T C G A T C