Information for 2-GCTGGGTTAAMTC (Motif 2)

A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
Reverse Opposite:
C A T G C G T A C A G T A C G T A G C T C G T A C G T A A G T C A G T C A G T C C G T A A C T G A G T C
p-value:1e-14
log p-value:-3.305e+01
Information Content per bp:1.800
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.0 +/- 21.8bp
Average Position of motif in Background45.8 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGTTAAMTC-
GYCTGGYYTNTGTCA
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------GCTGGGTTAAMTC
TCNCCTGCTGNGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCTGGGTTAAMTC
NGCTN---------
 A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCTGGGTTAAMTC
TNTCCTGCTGTGNNG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCTGGGTTAAMTC
NNTCCTGCTGTGNNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GCTGGGTTAAMTC
GCTGTG-------
 A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCTGGGTTAAMTC
CCTGCTGAGH------
 A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCTGGGTTAAMTC
WDNCTGGGCA-----
 A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GCTGGGTTAAMTC
HTGCTGAGTCAT---
 A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.56
Offset:-8
Orientation:forward strand
Alignment:--------GCTGGGTTAAMTC
GGCCYCCTGCTGDGH------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C T A G A C T G C G A T A C G T T C G A T G C A G T C A C G A T G A T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T