Information for 10-GCTARGCTACCTGAGT (Motif 17)

C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T
Reverse Opposite:
G C T A G A T C C G A T A G T C C G T A C A T G C A T G G C A T C G T A A C T G A G T C A G T C C G A T C G T A A C T G G A T C
p-value:1e-10
log p-value:-2.443e+01
Information Content per bp:1.705
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif12.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.9 +/- 25.2bp
Average Position of motif in Background47.9 +/- 34.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT-
-ACATGCTACCTAATAC
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T
A C G T C T G A G A T C G C T A G A C T T C A G G A T C A G C T C G T A G T A C G A T C G C A T T C G A G T C A C G A T G T C A T G A C

PB0155.1_Osr2_2/Jaspar

Match Rank:2
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT-
-ACTTGCTACCTACACC
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T
A C G T C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

PH0171.1_Nkx2-1/Jaspar

Match Rank:3
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT--
--TAAGCCACTTGAAATT
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T A C G T
A C G T A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0111.1_Nkx2-2/Jaspar

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT---
--ATAACCACTTGAAAATT
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT--
--TAAGCCACTTGAAATT
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T A C G T
A C G T A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PH0114.1_Nkx2-5/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT--
--TAAGCCACTTGAATTT
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T A C G T
A C G T A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:7
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----GCTARGCTACCTGAGT
KGTTGCTAGGMAACA-----
 A C G T A C G T A C G T A C G T C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:8
Score:0.50
Offset:9
Orientation:reverse strand
Alignment:GCTARGCTACCTGAGT----
---------CTTGAGTGGCT
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.50
Offset:5
Orientation:reverse strand
Alignment:GCTARGCTACCTGAGT
-----ACTTCCTGTT-
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G A T C G A T A G T C A G T C A C G T T A C G G A C T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GCTARGCTACCTGAGT--
--TAAGCCACTTAACATT
 C T A G G T A C G C A T C G T A C T A G T C A G G T A C C G A T C G T A G T A C G T A C A C G T C T A G C G T A C T A G C G A T A C G T A C G T
A C G T A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T