p-value: | 1e-6 |
log p-value: | -1.437e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 3.0 |
Percentage of Target Sequences with motif | 0.42% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 59.2 +/- 25.3bp |
Average Position of motif in Background | 82.5 +/- 0.5bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCTTAAGAG RSCACTYRAG-- |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 2 |
Score: | 0.64 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCTTAAGAG NSCACTYVAV-- |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 3 |
Score: | 0.63 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCTTAAGAG ACCACTTAA--- |
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HOXC13/MA0907.1/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | CTCTTAAGAG- NTTTTACGAGN |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -CTCTTAAGAG------ NTNNTTAAGTGGNTNAN |
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Nkx2-5/MA0063.1/Jaspar
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | CTCTTAAGAG ---TTAATTG |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 7 |
Score: | 0.62 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---CTCTTAAGAG AASCACTCAA--- |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 8 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --CTCTTAAGAG ACCACTTAA--- |
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PH0048.1_Hoxa13/Jaspar
Match Rank: | 9 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCTTAAGAG---- ANATTTTACGAGNNNN |
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PH0068.1_Hoxc13/Jaspar
Match Rank: | 10 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --CTCTTAAGAG---- NAATTTTACGAGNTNN |
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