Information for 9-TAGGCTCCGC (Motif 21)

A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C
Reverse Opposite:
A T C G T A G C C T A G A T C G C T G A A T C G A T G C A T G C C G A T G T C A
p-value:1e-9
log p-value:-2.273e+01
Information Content per bp:1.713
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif3.21%
Number of Background Sequences with motif278.1
Percentage of Background Sequences with motif0.59%
Average Position of motif in Targets53.9 +/- 24.6bp
Average Position of motif in Background48.8 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.76
Offset:3
Orientation:forward strand
Alignment:TAGGCTCCGC
---GCTCCG-
 A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAGGCTCCGC----
--GGCCCCGCCCCC
 A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TAGGCTCCGC
--NGCTN---
 A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:TAGGCTCCGC-----
---GCTCCGCCCMCY
 A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:TAGGCTCCGC----
CAGGCCNNGGCCNN
 A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCTCCGC---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

PB0113.1_E2F3_2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TAGGCTCCGC---
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T A C G T A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TAGGCTCCGC----
TACGAGACTCCTCTAAC
 A C G T A C G T A C G T A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:TAGGCTCCGC-----
-NAGCCCCGCCCCCN
 A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

NFIX/MA0671.1/Jaspar

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TAGGCTCCGC
NTTGGCANN--
 A C G T A C G T C G T A T A C G A T C G A T G C A G C T A T G C A G T C A T C G A T G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T