Information for 10-GCTWATCMCCAGT (Motif 20)

C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
Reverse Opposite:
C G T A A T G C A C G T A C T G C T A G A C G T A T C G T C G A C G A T G C A T C G T A T A C G G A T C
p-value:1e-10
log p-value:-2.314e+01
Information Content per bp:1.683
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.37%
Number of Background Sequences with motif137.6
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets57.6 +/- 24.5bp
Average Position of motif in Background49.8 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0139.1_Pitx3/Jaspar

Match Rank:1
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCTWATCMCCAGT
GNNAGCTAATCCCCCN-
 A C G T A C G T A C G T A C G T C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T

PH0015.1_Crx/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCTWATCMCCAGT-
AGGCTAATCCCCAANG
 A C G T A C G T C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

GSC/MA0648.1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GCTWATCMCCAGT
GCTAATCCCC---
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTWATCMCCAGT
CCTAATCCGC---
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GCTWATCMCCAGT
GCTAATCC-----
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
A T C G G A T C G C A T C G T A G T C A A C G T A T G C A G T C A C G T A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTWATCMCCAGT
-YTAATCCY----
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
A C G T G A T C G C A T C G T A C G T A A C G T G A T C G A T C A G T C A C G T A C G T A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTWATCMCCAGT-
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A

Crx/MA0467.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCTWATCMCCAGT
-CTAATCCTCTT-
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
A C G T G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTWATCMCCAGT
CTTAATCCC----
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCTWATCMCCAGT
NYTAATCCYB---
 C T A G A G T C C G A T C G T A C G T A A G C T A T G C T G C A A G T C A G T C T C G A A T C G C G A T
A T C G G A C T C G A T C G T A C G T A C A G T G A T C G A T C G A T C A G C T A C G T A C G T A C G T