Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer | 1e-352 | -8.118e+02 | 0.0000 | 414.0 | 60.35% | 2256.1 | 4.82% | motif file (matrix) |
svg |
2 |
| FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-343 | -7.905e+02 | 0.0000 | 461.0 | 67.20% | 3438.2 | 7.34% | motif file (matrix) |
svg |
3 |
| FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer | 1e-327 | -7.552e+02 | 0.0000 | 420.0 | 61.22% | 2729.2 | 5.83% | motif file (matrix) |
svg |
4 |
| FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer | 1e-293 | -6.767e+02 | 0.0000 | 402.0 | 58.60% | 2884.9 | 6.16% | motif file (matrix) |
svg |
5 |
| Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer | 1e-292 | -6.744e+02 | 0.0000 | 277.0 | 40.38% | 802.4 | 1.71% | motif file (matrix) |
svg |
6 |
| Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer | 1e-265 | -6.105e+02 | 0.0000 | 366.0 | 53.35% | 2566.8 | 5.48% | motif file (matrix) |
svg |
7 |
| FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer | 1e-212 | -4.882e+02 | 0.0000 | 313.0 | 45.63% | 2335.6 | 4.99% | motif file (matrix) |
svg |
8 |
| FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer | 1e-184 | -4.252e+02 | 0.0000 | 318.0 | 46.36% | 3029.0 | 6.47% | motif file (matrix) |
svg |
9 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-182 | -4.202e+02 | 0.0000 | 261.0 | 38.05% | 1761.3 | 3.76% | motif file (matrix) |
svg |
10 |
| Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer | 1e-181 | -4.189e+02 | 0.0000 | 285.0 | 41.55% | 2282.0 | 4.87% | motif file (matrix) |
svg |
11 |
| Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer | 1e-159 | -3.682e+02 | 0.0000 | 273.0 | 39.80% | 2467.2 | 5.27% | motif file (matrix) |
svg |
12 |
| FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer | 1e-145 | -3.358e+02 | 0.0000 | 204.0 | 29.74% | 1265.6 | 2.70% | motif file (matrix) |
svg |
13 |
| Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer | 1e-123 | -2.854e+02 | 0.0000 | 329.0 | 47.96% | 5351.1 | 11.43% | motif file (matrix) |
svg |
14 |
| GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-51 | -1.183e+02 | 0.0000 | 204.0 | 29.74% | 4325.9 | 9.24% | motif file (matrix) |
svg |
15 |
| Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer | 1e-45 | -1.044e+02 | 0.0000 | 124.0 | 18.08% | 1810.9 | 3.87% | motif file (matrix) |
svg |
16 |
| Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer | 1e-44 | -1.017e+02 | 0.0000 | 147.0 | 21.43% | 2616.5 | 5.59% | motif file (matrix) |
svg |
17 |
| Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer | 1e-42 | -9.724e+01 | 0.0000 | 114.0 | 16.62% | 1635.6 | 3.49% | motif file (matrix) |
svg |
18 |
| Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer | 1e-42 | -9.683e+01 | 0.0000 | 151.0 | 22.01% | 2873.5 | 6.14% | motif file (matrix) |
svg |
19 |
| Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer | 1e-21 | -4.997e+01 | 0.0000 | 159.0 | 23.18% | 4832.4 | 10.32% | motif file (matrix) |
svg |
20 |
| Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer | 1e-20 | -4.709e+01 | 0.0000 | 94.0 | 13.70% | 2119.8 | 4.53% | motif file (matrix) |
svg |
21 |
| Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer | 1e-19 | -4.576e+01 | 0.0000 | 105.0 | 15.31% | 2606.3 | 5.57% | motif file (matrix) |
svg |
22 |
| Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer | 1e-19 | -4.517e+01 | 0.0000 | 145.0 | 21.14% | 4407.0 | 9.41% | motif file (matrix) |
svg |
23 |
| Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer | 1e-16 | -3.900e+01 | 0.0000 | 88.0 | 12.83% | 2155.9 | 4.60% | motif file (matrix) |
svg |
24 |
| Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer | 1e-14 | -3.404e+01 | 0.0000 | 133.0 | 19.39% | 4423.6 | 9.45% | motif file (matrix) |
svg |
25 |
| CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer | 1e-13 | -3.170e+01 | 0.0000 | 177.0 | 25.80% | 6854.4 | 14.64% | motif file (matrix) |
svg |
26 |
| Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer | 1e-12 | -2.917e+01 | 0.0000 | 69.0 | 10.06% | 1743.7 | 3.72% | motif file (matrix) |
svg |
27 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-12 | -2.843e+01 | 0.0000 | 47.0 | 6.85% | 923.4 | 1.97% | motif file (matrix) |
svg |
28 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-10 | -2.378e+01 | 0.0000 | 61.0 | 8.89% | 1624.3 | 3.47% | motif file (matrix) |
svg |
29 |
| HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer | 1e-10 | -2.304e+01 | 0.0000 | 50.0 | 7.29% | 1202.8 | 2.57% | motif file (matrix) |
svg |
30 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-9 | -2.114e+01 | 0.0000 | 47.0 | 6.85% | 1151.0 | 2.46% | motif file (matrix) |
svg |
31 |
| GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer | 1e-8 | -2.056e+01 | 0.0000 | 91.0 | 13.27% | 3181.2 | 6.79% | motif file (matrix) |
svg |
32 |
| Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer | 1e-8 | -2.034e+01 | 0.0000 | 67.0 | 9.77% | 2048.7 | 4.37% | motif file (matrix) |
svg |
33 |
| Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer | 1e-8 | -1.924e+01 | 0.0000 | 55.0 | 8.02% | 1565.3 | 3.34% | motif file (matrix) |
svg |
34 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.893e+01 | 0.0000 | 50.0 | 7.29% | 1363.2 | 2.91% | motif file (matrix) |
svg |
35 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-7 | -1.643e+01 | 0.0000 | 38.0 | 5.54% | 965.9 | 2.06% | motif file (matrix) |
svg |
36 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-6 | -1.572e+01 | 0.0000 | 183.0 | 26.68% | 8726.8 | 18.63% | motif file (matrix) |
svg |
37 |
| Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer | 1e-6 | -1.514e+01 | 0.0000 | 62.0 | 9.04% | 2110.7 | 4.51% | motif file (matrix) |
svg |
38 |
| Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer | 1e-6 | -1.463e+01 | 0.0000 | 132.0 | 19.24% | 5882.8 | 12.56% | motif file (matrix) |
svg |
39 |
| ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer | 1e-5 | -1.347e+01 | 0.0000 | 59.0 | 8.60% | 2072.8 | 4.43% | motif file (matrix) |
svg |
40 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-5 | -1.284e+01 | 0.0000 | 183.0 | 26.68% | 9111.0 | 19.45% | motif file (matrix) |
svg |
41 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-5 | -1.229e+01 | 0.0000 | 41.0 | 5.98% | 1286.6 | 2.75% | motif file (matrix) |
svg |
42 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-5 | -1.212e+01 | 0.0000 | 44.0 | 6.41% | 1435.5 | 3.07% | motif file (matrix) |
svg |
43 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-4 | -1.151e+01 | 0.0001 | 30.0 | 4.37% | 835.5 | 1.78% | motif file (matrix) |
svg |
44 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-4 | -1.100e+01 | 0.0001 | 35.0 | 5.10% | 1081.3 | 2.31% | motif file (matrix) |
svg |
45 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-4 | -1.042e+01 | 0.0002 | 33.0 | 4.81% | 1021.2 | 2.18% | motif file (matrix) |
svg |
46 |
| GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer | 1e-4 | -9.529e+00 | 0.0006 | 15.0 | 2.19% | 309.7 | 0.66% | motif file (matrix) |
svg |
47 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-4 | -9.217e+00 | 0.0008 | 232.0 | 33.82% | 12780.0 | 27.29% | motif file (matrix) |
svg |
48 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-3 | -9.051e+00 | 0.0009 | 37.0 | 5.39% | 1291.7 | 2.76% | motif file (matrix) |
svg |
49 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.649e+00 | 0.0013 | 20.0 | 2.92% | 535.6 | 1.14% | motif file (matrix) |
svg |
50 |
| Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer | 1e-3 | -8.452e+00 | 0.0016 | 22.0 | 3.21% | 629.3 | 1.34% | motif file (matrix) |
svg |
51 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-3 | -8.447e+00 | 0.0016 | 23.0 | 3.35% | 673.1 | 1.44% | motif file (matrix) |
svg |
52 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-3 | -8.412e+00 | 0.0016 | 15.0 | 2.19% | 343.7 | 0.73% | motif file (matrix) |
svg |
53 |
| ETS(ETS)/Promoter/Homer | 1e-3 | -7.949e+00 | 0.0024 | 17.0 | 2.48% | 439.3 | 0.94% | motif file (matrix) |
svg |
54 |
| ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer | 1e-3 | -7.788e+00 | 0.0028 | 26.0 | 3.79% | 844.7 | 1.80% | motif file (matrix) |
svg |
55 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.618e+00 | 0.0033 | 14.0 | 2.04% | 331.4 | 0.71% | motif file (matrix) |
svg |
56 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-3 | -7.552e+00 | 0.0034 | 218.0 | 31.78% | 12226.1 | 26.11% | motif file (matrix) |
svg |
57 |
| Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967) | 1e-3 | -7.480e+00 | 0.0036 | 45.0 | 6.56% | 1819.7 | 3.89% | motif file (matrix) |
svg |
58 |
| Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer | 1e-3 | -7.291e+00 | 0.0043 | 16.0 | 2.33% | 424.6 | 0.91% | motif file (matrix) |
svg |
59 |
| Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer | 1e-3 | -7.252e+00 | 0.0044 | 59.0 | 8.60% | 2600.5 | 5.55% | motif file (matrix) |
svg |
60 |
| Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer | 1e-3 | -7.182e+00 | 0.0046 | 38.0 | 5.54% | 1479.6 | 3.16% | motif file (matrix) |
svg |
61 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-3 | -7.040e+00 | 0.0052 | 23.0 | 3.35% | 747.5 | 1.60% | motif file (matrix) |
svg |
62 |
| Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer | 1e-3 | -6.932e+00 | 0.0057 | 16.0 | 2.33% | 439.3 | 0.94% | motif file (matrix) |
svg |
63 |
| GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer | 1e-2 | -6.866e+00 | 0.0060 | 41.0 | 5.98% | 1663.6 | 3.55% | motif file (matrix) |
svg |
64 |
| Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer | 1e-2 | -6.809e+00 | 0.0063 | 77.0 | 11.22% | 3675.2 | 7.85% | motif file (matrix) |
svg |
65 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-2 | -6.700e+00 | 0.0069 | 49.0 | 7.14% | 2109.8 | 4.50% | motif file (matrix) |
svg |
66 |
| SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer | 1e-2 | -6.643e+00 | 0.0072 | 49.0 | 7.14% | 2115.9 | 4.52% | motif file (matrix) |
svg |
67 |
| GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer | 1e-2 | -6.507e+00 | 0.0081 | 8.0 | 1.17% | 144.6 | 0.31% | motif file (matrix) |
svg |
68 |
| Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer | 1e-2 | -6.411e+00 | 0.0088 | 13.0 | 1.90% | 335.8 | 0.72% | motif file (matrix) |
svg |
69 |
| HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer | 1e-2 | -6.318e+00 | 0.0095 | 24.0 | 3.50% | 839.7 | 1.79% | motif file (matrix) |
svg |
70 |
| Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer | 1e-2 | -6.302e+00 | 0.0095 | 18.0 | 2.62% | 557.4 | 1.19% | motif file (matrix) |
svg |
71 |
| Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -6.150e+00 | 0.0109 | 27.0 | 3.94% | 999.6 | 2.13% | motif file (matrix) |
svg |
72 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.964e+00 | 0.0130 | 13.0 | 1.90% | 353.0 | 0.75% | motif file (matrix) |
svg |
73 |
| NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer | 1e-2 | -5.931e+00 | 0.0132 | 7.0 | 1.02% | 124.2 | 0.27% | motif file (matrix) |
svg |
74 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-2 | -5.915e+00 | 0.0133 | 61.0 | 8.89% | 2874.0 | 6.14% | motif file (matrix) |
svg |
75 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.878e+00 | 0.0136 | 46.0 | 6.71% | 2032.2 | 4.34% | motif file (matrix) |
svg |
76 |
| ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer | 1e-2 | -5.618e+00 | 0.0174 | 70.0 | 10.20% | 3436.6 | 7.34% | motif file (matrix) |
svg |
77 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -5.609e+00 | 0.0174 | 20.0 | 2.92% | 691.3 | 1.48% | motif file (matrix) |
svg |
78 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-2 | -5.574e+00 | 0.0177 | 8.0 | 1.17% | 169.0 | 0.36% | motif file (matrix) |
svg |
79 |
| Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -5.537e+00 | 0.0182 | 60.0 | 8.75% | 2866.5 | 6.12% | motif file (matrix) |
svg |
80 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-2 | -5.464e+00 | 0.0193 | 13.0 | 1.90% | 375.1 | 0.80% | motif file (matrix) |
svg |
81 |
| MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer | 1e-2 | -5.142e+00 | 0.0263 | 12.0 | 1.75% | 346.9 | 0.74% | motif file (matrix) |
svg |
82 |
| GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer | 1e-2 | -5.004e+00 | 0.0298 | 9.0 | 1.31% | 225.7 | 0.48% | motif file (matrix) |
svg |
83 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -4.941e+00 | 0.0314 | 84.0 | 12.24% | 4381.1 | 9.35% | motif file (matrix) |
svg |
84 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-2 | -4.887e+00 | 0.0327 | 65.0 | 9.48% | 3253.6 | 6.95% | motif file (matrix) |
svg |
85 |
| FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer | 1e-2 | -4.817e+00 | 0.0346 | 7.0 | 1.02% | 153.3 | 0.33% | motif file (matrix) |
svg |
86 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-2 | -4.739e+00 | 0.0370 | 113.0 | 16.47% | 6203.2 | 13.25% | motif file (matrix) |
svg |
87 |
| EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.705e+00 | 0.0379 | 39.0 | 5.69% | 1776.1 | 3.79% | motif file (matrix) |
svg |