Information for 9-RACTAAGTTAACMAAG (Motif 9)

C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G
Reverse Opposite:
A T G C G A C T A C G T A C G T A T C G C G A T A C G T C G T A C T G A A G T C C G A T G C A T C T G A C T A G G A C T G A C T
p-value:1e-11
log p-value:-2.730e+01
Information Content per bp:1.680
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif14.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets63.4 +/- 19.1bp
Average Position of motif in Background41.1 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0081.1_Tcf1_1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG--
-ACTTAGTTAACTAAAAA
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G A C G T A C G T
A C G T T G C A G A T C A G C T G A C T T C G A C T A G G A C T C G A T G C T A C G T A A G T C G A C T C T G A T C G A C T G A G T C A C T G A

PH0167.1_Tcf1/Jaspar

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:RACTAAGTTAACMAAG-
NTTTTAGTTAACNNAGN
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G A C G T
T G C A G A C T G C A T A C G T G A C T C T G A A T C G G C A T C G A T C G T A C T G A T A G C A G C T T C G A T G C A T A C G C T A G

FOXC2/MA0846.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG
---TAAGTAAACAAA-
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G
A C G T A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG-----
----AGAAGAACAAAGGACTA
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.62
Offset:4
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG-----
----ATAAGAACAAAGGACTA
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0015.1_Foxa2_1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG--
-AAAAAGTAAACAAAGAC
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G A C G T A C G T
A C G T G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:RACTAAGTTAACMAAG
------GTTAACTAGN
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG
-CAAAAGTAAACAAAG
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G
A C G T G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:RACTAAGTTAACMAAG
-NCWRWGTAAACANSV
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G
A C G T T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

PB0019.1_Foxl1_1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RACTAAGTTAACMAAG--
-TAAATGTAAACAAAGGT
 C T G A C T G A G A T C G A C T C G T A C G T A T C A G G A C T G A C T C G T A C G T A A T G C G T C A C G T A C T G A A T C G A C G T A C G T
A C G T C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T