Information for 17-GGAACTAGTT (Motif 34)

C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T
Reverse Opposite:
C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A G T C A G T C
p-value:1e-3
log p-value:-9.157e+00
Information Content per bp:1.961
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.44%
Number of Background Sequences with motif6.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.8 +/- 23.8bp
Average Position of motif in Background48.6 +/- 8.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0040.1_Hmbox1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GGAACTAGTT------
GAAAACTAGTTAACATC
 A C G T C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G G C T A C T G A C T G A C G T A A G T C A C G T C T G A C T A G A C G T G C A T C G T A C G T A A G T C C G T A C G A T A T G C

HMBOX1/MA0895.1/Jaspar

Match Rank:2
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GGAACTAGTT---
---ACTAGTTAAC
 C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T G C A A G T C C G A T C T G A A T C G C G A T G C A T C G T A G T C A T A G C

TFCP2/MA0145.3/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GGAACTAGTT-
-AAACCGGTTT
 C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T
A C G T C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T

PH0028.1_En1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GGAACTAGTT-----
GCGAACTAATTAATGC
 A C G T C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T C A G T A G C T A C G T G C A T G C A A G T C A G C T C T G A C T G A C G A T A C G T C T G A C T G A A C G T C T A G T A G C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GGAACTAGTT---
TTGACCTANTTATN
 A C G T C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

PH0168.1_Hnf1b/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAACTAGTT-------
ANNNCTAGTTAACNGNN
 C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A T A G C C T A G T C A G A G T C G C A T T C G A C T A G C A G T C G A T C G T A C G T A A G T C T G C A C T A G T G A C G C A T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GGAACTAGTT
TGACCTARTT
 C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0115.1_Ehf_2/Jaspar

Match Rank:8
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGAACTAGTT
AAGATCGGAANTNNNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T
C G T A G C T A A T C G C G T A C G A T T G A C C A T G C T A G C G T A C G T A T G C A G A C T G T C A A G T C G C A T G C T A

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------GGAACTAGTT
TTAAGAGGAAGTTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GGAACTAGTT--
AAAACCGGTTTT
 C T A G A C T G C G T A C G T A A G T C A C G T C G T A A C T G A C G T A C G T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T