Information for 6-AGGTMAATATTTG (Motif 3)

C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
Reverse Opposite:
A G T C G C T A C G T A C G T A A C G T C G T A A C G T A C G T A C T G C T G A G T A C A G T C G A C T
p-value:1e-23
log p-value:-5.418e+01
Information Content per bp:1.828
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.75%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.1 +/- 24.8bp
Average Position of motif in Background30.4 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.75
Offset:3
Orientation:forward strand
Alignment:AGGTMAATATTTG----
---CTAATATTGCTAAA
 C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.75
Offset:3
Orientation:forward strand
Alignment:AGGTMAATATTTG----
---CTAATATTGCTAAA
 C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

FOXB1/MA0845.1/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGGTMAATATTTG
TATGTAAATAT---
 A C G T C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AGGTMAATATTTG
TATGTAAATAT---
 A C G T C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T A C G T A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-AGGTMAATATTTG
WAAGTAAAYA----
 A C G T C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T A C G T A C G T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:6
Score:0.64
Offset:5
Orientation:forward strand
Alignment:AGGTMAATATTTG
-----AATAATT-
 C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
A C G T A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:7
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGTMAATATTTG
TAAGTAAACAAA--
 A C G T C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A A C G T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTMAATATTTG
AAAGTAAACA----
 A C G T C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T A C G T A C G T

PH0119.1_Nkx6-1_2/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGGTMAATATTTG--
GANGTAATTAATTANN
 A C G T C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G A C G T A C G T
T C A G C T G A T G C A T C A G G A C T T G C A C G T A C G A T G A C T C T G A G C T A C G A T C G A T C T G A A G T C A G C T

Foxd3/MA0041.1/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGGTMAATATTTG
AAACAAACATTC-
 C T G A C T A G A C T G A G C T G T A C C G T A C G T A A C G T C G T A A C G T A C G T C G A T C T A G
C T G A T G C A C T G A G A T C G T C A C G T A C G T A G A T C C T G A C G A T C G A T G A T C A C G T