Information for 20-CAATACAATTAAAGTG (Motif 29)

G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C G T A C G T A C G T C G T A G C T A A G C T A C G T A C T G A C G T C G T A A G C T A C G T A C T G
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.915
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.5 +/- 27.7bp
Average Position of motif in Background64.1 +/- 7.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0066.1_Sox17_1/Jaspar

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAATACAATTAAAGTG
ATAAACAATTAAACA-
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G
T G C A C G A T C T G A C G T A C G T A A G T C C G T A C G T A C G A T C G A T T C G A G C T A G C A T G A T C C G T A A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:CAATACAATTAAAGTG-----
-----AAATTCAAGTGGNTTN
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Phox2b/MA0681.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAATACAATTAAAGTG
TAATTTAATTA-----
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G
G C A T C T G A T C G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CAATACAATTAAAGTG
AAAAACCAATTAAGAA-
 A C G T G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A A C G T

PHOX2A/MA0713.1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CAATACAATTAAAGTG
TAATTTAATTA-----
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G
G C A T C T G A C T G A G A C T A G C T G A C T T C G A T C G A A G C T G C A T C G T A A C G T A C G T A C G T A C G T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAATACAATTAAAGTG--
-AATGCAATAAAATTTAT
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

SOX4/MA0867.1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CAATACAATTAAAGTG--
--GAACAATTGCAGTGTT
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CAATACAATTAAAGTG
----CCAATTAA----
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G
A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A A C G T A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:9
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CAATACAATTAAAGTG--
--------NTCAAGTGGN
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:CAATACAATTAAAGTG-
--------NTCAAGTGG
 G T A C C G T A C T G A A C G T G T C A A G T C C G T A C T G A C A G T A C G T C G T A C G T A C G T A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G