Information for 18-TGCTGGAGTGACCTCT (Motif 27)

A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T
Reverse Opposite:
C G T A C T A G C T G A A C T G A C T G A C G T A T G C C G T A A G T C A C G T A G T C A G T C C G T A C T A G A G T C C G T A
p-value:1e-8
log p-value:-2.009e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets16.0 +/- 7.6bp
Average Position of motif in Background61.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.67
Offset:8
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT
--------TGACCYCT
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.63
Offset:7
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT
-------GTGACCTT-
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:3
Score:0.63
Offset:8
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT
--------TGACCTYA
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

PB0053.1_Rara_1/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT----
----NNNGTGACCTTTGNNN
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT----
---NNNNTTGACCCCTNNNN
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0049.1_Nr2f2_1/Jaspar

Match Rank:6
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT----
----NNNNTGACCTTTNNNN
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.60
Offset:8
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT
--------TGACCT--
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TGCTGGAGTGACCTCT-
-------CTGACCTTTG
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.59
Offset:8
Orientation:forward strand
Alignment:TGCTGGAGTGACCTCT----
--------TGACCTTTNCNT
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.59
Offset:3
Orientation:forward strand
Alignment:TGCTGGAGTGACCTCT----
---TGTCGTGACCCCTTAAT
 A C G T A C T G G A T C C G A T C T A G A C T G C G T A A C T G A C G T A T C G C G T A A G T C A G T C A G C T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T