Information for 16-RGRMARKGAGATGCAY (Motif 19)

C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
Reverse Opposite:
C T A G A C G T A T C G A G T C C G T A A C G T A G T C C G A T A G T C G T C A A G T C A C G T A C G T A G C T A G T C A G T C
p-value:1e-9
log p-value:-2.248e+01
Information Content per bp:1.844
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.2 +/- 26.9bp
Average Position of motif in Background47.9 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:RGRMARKGAGATGCAY
CGGAAGTGAAAC----
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
T G A C C T A G T C A G G T C A C G T A T C A G C G A T T C A G T C G A T G C A C T G A T A G C A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:2
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RGRMARKGAGATGCAY
-GRAASTGAAAST---
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.52
Offset:1
Orientation:forward strand
Alignment:RGRMARKGAGATGCAY--
-TATTATGGGATGGATAA
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C A C G T A C G T
A C G T C G A T T C G A C A G T C G A T G T C A C G A T C A T G C A T G C A T G C T G A C A G T C T A G A C T G T G C A C A G T C G T A T G C A

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----RGRMARKGAGATGCAY
NANTGGAAAAANTGAGTCAN
 A C G T A C G T A C G T A C G T C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
T A C G C T G A T C G A C G A T C T A G C T A G T C G A C T G A T C G A T C G A C G T A T C G A G C A T C A T G C G T A T A C G G C A T T G A C C G T A A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:RGRMARKGAGATGCAY
GGAAANTGAAACTNA-
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:forward strand
Alignment:RGRMARKGAGATGCAY
-GGAAGTGAAAST---
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:RGRMARKGAGATGCAY
------GHATATKCAT
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:8
Score:0.50
Offset:7
Orientation:forward strand
Alignment:RGRMARKGAGATGCAY-
-------MTGATGCAAT
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A G C T C A T G C G T A A G C T A C T G G A T C G T C A C G T A A G C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:RGRMARKGAGATGCAY
----AAGGATATNTN-
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C
A C G T A C G T A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:forward strand
Alignment:RGRMARKGAGATGCAY--
GGAAAGCGAAACCAAAAC
 C T A G A C T G C T G A T G C A C G T A T C A G A C G T A C T G C G T A A C T G C G T A A C G T A C T G A T G C C G T A A G T C A C G T A C G T
A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C