Information for 4-AGCAGAGGGAGCT (Motif 2)

C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G T A G C A C G T A G T C A G T C A G T C A C G T A G T C C G A T A C T G A G T C A C G T
p-value:1e-21
log p-value:-4.933e+01
Information Content per bp:1.905
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.3 +/- 26.6bp
Average Position of motif in Background35.8 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGCAGAGGGAGCT----
GCCASCAGGGGGCGCYVNNG
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AGCAGAGGGAGCT
------CGGAGC-
 C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T

CTCF/MA0139.1/Jaspar

Match Rank:3
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGCAGAGGGAGCT-
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:-5
Orientation:reverse strand
Alignment:-----AGCAGAGGGAGCT--
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGGGAGCT
AACAGATGGC---
 C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T A C G T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGCAGAGGGAGCT
AACAGATGGT---
 C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---AGCAGAGGGAGCT
CACAGCAGGGGG----
 A C G T A C G T A C G T C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:forward strand
Alignment:AGCAGAGGGAGCT
-GRTGMTRGAGCC
 C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
A C G T A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AGCAGAGGGAGCT
---GGCGGGAARN
 C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AGCAGAGGGAGCT
-GGTTAGAGACCT
 C G T A A C T G G T A C C G T A A C T G C G T A A C T G C T A G A C T G C G T A A C T G A G T C A C G T
A C G T C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T