Information for 12-SGGGARAMYACAG (Motif 13)

A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G C T C T G A A C T G A C G T A G C T A C G T A G T C A G T C A G T C A T G C
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.875
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets60.8 +/- 18.9bp
Average Position of motif in Background46.7 +/- 16.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:forward strand
Alignment:SGGGARAMYACAG
---NAAACCACAG
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:4
Orientation:reverse strand
Alignment:SGGGARAMYACAG-
----AAACCACAGC
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:SGGGARAMYACAG--
----AAACCACAGAN
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:SGGGARAMYACAG-
----AAACCACANN
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:SGGGARAMYACAG--
---NWAACCACADNN
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-SGGGARAMYACAG
TGGGGA--------
 A C G T A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:SGGGARAMYACAG-
--------CACAGN
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---SGGGARAMYACAG
TGGCGGGAAAHB----
 A C G T A C G T A C G T A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:SGGGARAMYACAG
-TGGAAAA-----
 A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--SGGGARAMYACAG
GGCGGGAARN-----
 A C G T A C G T A T C G A C T G A C T G A C T G C G T A C T G A C G T A G T A C G A C T C T G A A G T C C G T A A C T G
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T A C G T A C G T