Information for 7-CGCYTCCAGA (Motif 7)

A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T A C T G A C T G C T G A C T A G A T C G A G T C A C T G
p-value:1e-7
log p-value:-1.801e+01
Information Content per bp:1.880
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif48.8
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets56.6 +/- 26.4bp
Average Position of motif in Background49.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGCYTCCAGA--
CGCCCCCTGACA
 A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A A C G T A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CGCYTCCAGA--
--ATGCCAGACN
 A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Gabpa/MA0062.2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CGCYTCCAGA
NCCACTTCCGG-
 A C G T A C G T A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGCYTCCAGA
CACTTCCTGT
 A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCYTCCAGA-------
CAAATCCAGACATCACA
 A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCYTCCAGA
CACTTCCTGT
 A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CGCYTCCAGA--
GGTCCCGCCCCCTTCTC
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

ELK4/MA0076.2/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGCYTCCAGA
CCACTTCCGGC
 A C G T A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

PB0077.1_Spdef_1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CGCYTCCAGA-----
GTACATCCGGATTTTT
 A C G T A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCYTCCAGA-
NNAYTTCCTGHN
 A C G T A G T C A C T G A T G C A G T C A G C T A G T C A G T C C G T A A C T G C G T A A C G T
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T