Information for 4-CCTGCCTCACACTTGG (Motif 5)

A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C T G A A C T G A C G T C T A G C G A T A C T G C T G A C T A G C T A G G T A C C G T A A T C G A T C G
p-value:1e-12
log p-value:-2.770e+01
Information Content per bp:1.809
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.9 +/- 30.8bp
Average Position of motif in Background43.6 +/- 17.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CCTGCCTCACACTTGG
-CTGTCTGTCACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

ZEB1/MA0103.2/Jaspar

Match Rank:2
Score:0.61
Offset:6
Orientation:forward strand
Alignment:CCTGCCTCACACTTGG
------CCTCACCTG-
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:3
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
------TCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C C T G A A T G C T C G A A G T C A G T C G A C T A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
------TCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
--TGTCTGDCACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:6
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
------TCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T

TBX4/MA0806.1/Jaspar

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
------TCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C C T G A A G T C T C G A A T G C A G T C G A C T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
----TTTCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
------TCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T G A C T T G A C T C G A A G T C T G C A G T A C A G T C G A C T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:10
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCTGCCTCACACTTGG
----KTTCACACCT--
A T G C A T G C A C G T A C T G A G T C A G T C A G C T A G T C C G T A A G T C G T C A A G T C A G C T C G A T A C T G A C T G
A C G T A C G T A C G T A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T