Information for 23-TGSCCWCTGTGTYWKT (Motif 44)

A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
Reverse Opposite:
G T C A G T A C C G T A C T A G C G T A A G T C G T C A A G T C C T G A A C T G G C A T A C T G A C T G A T C G A G T C C G T A
p-value:1e-6
log p-value:-1.415e+01
Information Content per bp:1.857
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.2 +/- 21.5bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TGSCCWCTGTGTYWKT
CTGACCTTTG-------
 A C G T A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGSCCWCTGTGTYWKT
TGACCYCT--------
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.54
Offset:5
Orientation:forward strand
Alignment:TGSCCWCTGTGTYWKT
-----GCTGTG-----
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-TGSCCWCTGTGTYWKT
ATGCCCACC--------
 A C G T A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TGSCCWCTGTGTYWKT
CNNTTGACCTTTG-------
 A C G T A C G T A C G T A C G T A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGSCCWCTGTGTYWKT
---CCTTTGTT-----
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGSCCWCTGTGTYWKT
AGGVNCCTTTGT----
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGSCCWCTGTGTYWKT
NNNCCATTGTGTNAN-
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TGSCCWCTGTGTYWKT
------CTTTGT----
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGSCCWCTGTGTYWKT
TGACCTYA--------
 A C G T A C T G T A C G A G T C A G T C C G T A A G T C A G C T A C T G A C G T A C T G A C G T A G T C C G A T A C T G A C G T
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T