Information for 3-GRCACTGAGGACCAST (Motif 4)

A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
Reverse Opposite:
C T G A A T G C A C G T T A C G A T C G C G A T A T G C A G T C C A G T A G T C C G T A A T C G A C G T A C T G A G C T A G T C
p-value:1e-12
log p-value:-2.809e+01
Information Content per bp:1.720
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif7.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.6 +/- 23.5bp
Average Position of motif in Background62.0 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GRCACTGAGGACCAST
TCCCCTGGGGAC----
 A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T A C G T

VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer

Match Rank:2
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GRCACTGAGGACCAST
NGAGGTCANNGAGTTCANNN
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
C T G A T C A G C T G A C T A G C A T G A C G T A T G C C G T A A T G C G C A T T C A G C T G A A C T G A C G T C A G T A G T C C G T A C A G T C T A G C A T G

PPARG/MA0066.1/Jaspar

Match Rank:3
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GRCACTGAGGACCAST
GTAGGTCACGGTGACCTACT
 A C G T A C G T A C G T A C G T A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
A T C G C G A T C T G A A T C G C A T G A C G T T A G C G C T A G T A C A T C G C A T G C A G T T A C G G T C A G T A C A G T C G A C T G T C A A T G C C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GRCACTGAGGACCAST
-WDNCTGGGCA-----
 A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T A C G T A C G T A C G T A C G T

ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-GRCACTGAGGACCAST--------
RGGCAMTAGGGAGCCATRGAAGGTK
 A C G T A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G C T A G C T A G A G T C T C G A T G C A G A C T C T G A A C T G A C T G A C T G C G T A A C T G A G T C G A T C C G T A A G C T C T A G A T C G G T C A C T G A C T A G T C A G A C G T A C G T

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GRCACTGAGGACCAST
RGGGCACTAACY------
 A C G T A C G T A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
T C G A C A T G C A T G T A C G G T A C T C G A A G T C C A G T C T G A C G T A A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GRCACTGAGGACCAST
NNNANTGA--------
 A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GRCACTGAGGACCAST
GACAATGNN-------
 A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-GRCACTGAGGACCAST
MRSCACTYAA-------
 A C G T A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:forward strand
Alignment:---GRCACTGAGGACCAST
AATCGCACTGCATTCCG--
 A C G T A C G T A C G T A C T G C T G A A G T C G T C A A T G C C G A T A C T G G C T A A C T G A T C G C G T A A T G C A G T C G T C A T A C G A G C T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G A C G T A C G T