Information for 10-CGTCTGTGAT (Motif 31)

A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T
Reverse Opposite:
C G T A A C G T A G T C C G T A A G T C C G T A A C T G C G T A A G T C A C T G
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.5 +/- 25.3bp
Average Position of motif in Background70.3 +/- 3.1bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CGTCTGTGAT
VBSYGTCTGG---
 A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CGTCTGTGAT
GGTCTGGCAT
 A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CGTCTGTGAT
CTGTCTGG---
 A C G T A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----CGTCTGTGAT--
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CGTCTGTGAT
--GCTGTG--
 A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CGTCTGTGAT----
NCNTTTGTTATTTNN
 A C G T A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T A C G T A C G T A C G T A C G T
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGTCTGTGAT--
-GTCTGTGGTTT
 A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGTCTGTGAT--
-TGCTGTGATTT
 A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T A C G T A C G T
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CGTCTGTGAT--
--GCTGTGGTTT
 A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T A C G T A C G T
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGTCTGTGAT
ACCATCTGTT--
 A C G T A C G T A G T C A C T G A C G T A G T C A C G T A C T G A C G T C T A G C G T A A C G T
T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T A C G T