Information for 7-GCAGATCACT (Motif 26)

A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G T C G A A C G T A G T C A G C T A C T G T G A C
p-value:1e-9
log p-value:-2.195e+01
Information Content per bp:1.834
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.99%
Number of Background Sequences with motif70.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets41.7 +/- 23.1bp
Average Position of motif in Background56.2 +/- 32.8bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR4A2/MA0160.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GCAGATCACT
-AAGGTCAC-
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T
A C G T C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAGATCACT-
-CAAATCACTG
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T
A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PB0099.1_Zfp691_1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCAGATCACT-----
NNNNTGAGCACTGTNNG
 A C G T A C G T A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCAGATCACT
HNRAATCAAT
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T
G C T A A C T G T C G A C T G A C T G A A C G T T A G C C T G A C G T A C G A T

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCAGATCACT--
--DGATCRATAN
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T A C G T
A C G T A C G T C T A G C T A G C T G A A C G T A G T C C T A G C G T A A C G T G T C A G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAGATCACT---
---AAGCACTTAA
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCAGATCACT
--AGATAASR
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T
A C G T A C G T G C T A A T C G G C T A G A C T G C T A T C G A T A G C T C G A

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGATCACT------
GAAGATCAATCACTTA
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G C G T A T C G A T A C G G C T A C G A T A G T C C G T A C T G A C A G T G A T C C T G A G T A C A G C T G C A T C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:GCAGATCACT---
---MRSCACTYAA
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCAGATCACT---
---AASCACTCAA
 A C T G G T A C C T G A C T A G G T C A A G C T T G A C G T C A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A