Information for 6-CCTCTGGTGTCAC (Motif 22)

A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
Reverse Opposite:
A T C G A C G T A C T G G T C A A G T C C G T A A G T C A G T C C G T A A T C G C G T A A C T G A T C G
p-value:1e-9
log p-value:-2.302e+01
Information Content per bp:1.930
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif4.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.3 +/- 27.0bp
Average Position of motif in Background52.0 +/- 7.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CCTCTGGTGTCAC----
TNNNNGGTGTCATNTNT
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C A C G T A C G T A C G T A C G T
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CCTCTGGTGTCAC
----AGGTGTCA-
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCTCTGGTGTCAC
GCTGTGGTTT---
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T

TBX5/MA0807.1/Jaspar

Match Rank:4
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCTCTGGTGTCAC
----AGGTGTGA-
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
A C G T A C G T A C G T A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CCTCTGGTGTCAC-
----AGGTGTGAAM
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C A C G T
A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

MEIS3/MA0775.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCTCTGGTGTCAC
-----CCTGTCAA
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
A C G T A C G T A C G T A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCTCTGGTGTCAC
CCTTTGAWGT---
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CCTCTGGTGTCAC
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:CCTCTGGTGTCAC--
-----VBTGWCAGCB
 A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T G C A C G T A C T G C G T A A G T C C G T A A T C G A T G C A G T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.57
Offset:-9
Orientation:forward strand
Alignment:---------CCTCTGGTGTCAC
CNNBRGCGCCCCCTGSTGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A T G C A C G T A C T G A C T G C G A T A C T G A C G T A G T C C G T A A T G C
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T A C G T