Information for 12-AGAGGCTCAGCATGTA (Motif 14)

C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A
Reverse Opposite:
A C G T G T C A A G T C C G T A A C G T A C T G A G T C C G A T A T C G G T C A A T C G A G T C A G T C A G C T A G T C A C G T
p-value:1e-11
log p-value:-2.538e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.76%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets34.6 +/- 19.6bp
Average Position of motif in Background21.3 +/- 3.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:AGAGGCTCAGCATGTA
----DCTCAGCAGG--
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A
A C G T A C G T A C G T A C G T C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGGCTCAGCATGTA-
--CCACACAGCAGGAGA
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AGAGGCTCAGCATGTA-
--GAGCACAGCAGGACA
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:AGAGGCTCAGCATGTA
-----GTCAGCANNTN
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A
A C G T A C G T A C G T A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:forward strand
Alignment:AGAGGCTCAGCATGTA-
--CCACACAGCAGGAGA
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AGAGGCTCAGCATGTA
--TGAGTCAGCA----
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A
A C G T A C G T G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.54
Offset:5
Orientation:forward strand
Alignment:AGAGGCTCAGCATGTA-
-----CACAGCAGGGGG
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:AGAGGCTCAGCATGTA
-GAGSCCGAGC-----
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T A C G T A C G T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:AGAGGCTCAGCATGTA
-ATGACTCAGCAD---
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A
A C G T T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAGGCTCAGCATGTA---
----DCHCAGCAGGRGGCC
 C G T A A C T G C T G A A C T G A C T G A T G C A C G T A T G C C G T A A C T G A G T C G T C A A C G T A C T G C A G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C