Homer Known Motif Enrichment Results (hs_EmbryonicStemCells_H1hESC_Normal_USF1_SRX100471_homermotifs_10_13_16)

Homer de novo Motif Results
Gene Ontology Enrichment Results
Known Motif Enrichment Results (txt file)
Total Target Sequences = 716, Total Background Sequences = 47174
RankMotifNameP-valuelog P-pvalueq-value (Benjamini)# Target Sequences with Motif% of Targets Sequences with Motif# Background Sequences with Motif% of Background Sequences with MotifMotif File SVG
1 T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer1e-266-6.134e+020.0000262.036.59%787.81.67%motif file (matrix) svg
2 T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer1e-231-5.336e+020.0000282.039.39%1374.52.91%motif file (matrix) svg
3 C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer1e-218-5.041e+020.0000438.061.17%5459.111.57%motif file (matrix) svg
4 T C A G A G C T A T G C C G T A A G C T T C A G C A G T A C T G C T G A A G T C MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer1e-212-4.900e+020.0000317.044.27%2297.14.87%motif file (matrix) svg
5 C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer1e-188-4.342e+020.0000269.037.57%1739.53.69%motif file (matrix) svg
6 A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer1e-130-3.007e+020.0000278.038.83%3243.46.87%motif file (matrix) svg
7 T C A G A G C T A T G C C G T A A G T C T C A G A C G T A T C G T C G A A G T C G A T C T G A C TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer1e-123-2.841e+020.0000104.014.53%187.60.40%motif file (matrix) svg
8 C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer1e-109-2.522e+020.0000304.042.46%4838.910.25%motif file (matrix) svg
9 C A T G G T A C C G T A A G T C C T A G A C G T A C T G G T A C A G T C A G C T bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer1e-77-1.793e+020.0000129.018.02%966.22.05%motif file (matrix) svg
10 T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer1e-74-1.724e+020.0000168.023.46%1939.34.11%motif file (matrix) svg
11 T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer1e-68-1.583e+020.0000148.020.67%1606.63.40%motif file (matrix) svg
12 T A C G T C G A T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer1e-68-1.571e+020.0000172.024.02%2271.64.81%motif file (matrix) svg
13 A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A E-box(bHLH)/Promoter/Homer1e-62-1.431e+020.000068.09.50%231.80.49%motif file (matrix) svg
14 T C A G T C A G T A G C A G T C C T G A A G T C C T A G A C G T A C T G A T C G c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer1e-38-8.808e+010.0000110.015.36%1617.83.43%motif file (matrix) svg
15 T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer1e-34-7.900e+010.000047.06.56%251.80.53%motif file (matrix) svg
16 T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer1e-25-5.895e+010.000049.06.84%444.50.94%motif file (matrix) svg
17 C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer1e-17-4.030e+010.000037.05.17%386.50.82%motif file (matrix) svg
18 T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer1e-8-2.064e+010.0000120.016.76%4495.49.52%motif file (matrix) svg
19 C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer1e-8-1.867e+010.000097.013.55%3486.77.39%motif file (matrix) svg
20 T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer1e-7-1.690e+010.0000193.026.96%8840.018.73%motif file (matrix) svg
21 C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer1e-7-1.678e+010.000053.07.40%1539.43.26%motif file (matrix) svg
22 A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer1e-6-1.415e+010.0000116.016.20%4851.410.28%motif file (matrix) svg
23 A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C CRE(bZIP)/Promoter/Homer1e-5-1.357e+010.000030.04.19%724.71.54%motif file (matrix) svg
24 T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer1e-5-1.276e+010.0000143.019.97%6493.913.76%motif file (matrix) svg
25 T G A C G T A C C G T A A C T G T G A C C G A T A C T G A T C G A G C T T A C G T C G A T A G C G T A C C G T A A T C G T G A C G C A T A C T G A C T G A T G C Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer1e-4-1.094e+010.000317.02.37%329.90.70%motif file (matrix) svg
26 A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer1e-4-1.091e+010.0003184.025.70%9120.519.32%motif file (matrix) svg
27 C T A G T C G A A C G T A C T G C G T A T A G C C G A T G T A C C G T A A G C T G A T C G T A C Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer1e-4-9.450e+000.001119.02.65%447.60.95%motif file (matrix) svg
28 C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer1e-4-9.238e+000.001356.07.82%2164.14.59%motif file (matrix) svg
29 C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer1e-3-8.500e+000.00268.01.12%102.60.22%motif file (matrix) svg
30 G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer1e-3-7.785e+000.005038.05.31%1381.72.93%motif file (matrix) svg
31 C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer1e-3-7.509e+000.006464.08.94%2749.15.82%motif file (matrix) svg
32 G C T A G C A T G A C T G C A T T C A G G T A C G C T A G C A T C T G A G C T A T A G C G C T A C T G A C G A T C T A G OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer1e-3-7.454e+000.00669.01.26%150.30.32%motif file (matrix) svg
33 T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G NFY(CCAAT)/Promoter/Homer1e-3-7.256e+000.007845.06.28%1775.33.76%motif file (matrix) svg
34 T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer1e-3-7.062e+000.009241.05.73%1588.33.37%motif file (matrix) svg
35 C T A G T C G A C G A T A C T G C G T A T A C G A G C T T G A C G C T A A C G T G A T C T A G C Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer1e-2-6.884e+000.010721.02.93%640.11.36%motif file (matrix) svg
36 C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer1e-2-6.835e+000.0109175.024.44%9297.519.70%motif file (matrix) svg
37 C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer1e-2-6.813e+000.01093.00.42%13.10.03%motif file (matrix) svg
38 A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer1e-2-6.661e+000.012322.03.07%697.51.48%motif file (matrix) svg
39 T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C Sp1(Zf)/Promoter/Homer1e-2-6.468e+000.014523.03.21%754.91.60%motif file (matrix) svg
40 C T A G T C G A G C A T C A T G G C T A T A G C C G A T G T A C C T G A A G C T JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer1e-2-6.391e+000.015329.04.05%1044.62.21%motif file (matrix) svg
41 C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer1e-2-6.001e+000.022065.09.08%2983.46.32%motif file (matrix) svg
42 C A G T T G C A A C G T A C T G C G T A A T C G C G A T T G A C C G T A A C G T BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer1e-2-5.968e+000.022231.04.33%1175.32.49%motif file (matrix) svg
43 A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer1e-2-5.940e+000.0223107.014.94%5399.211.44%motif file (matrix) svg
44 A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer1e-2-5.787e+000.025459.08.24%2678.25.67%motif file (matrix) svg
45 A C T G C T A G T C G A C G A T C A T G G C T A A T C G C G A T G T A C G C T A A G C T G T A C Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer1e-2-5.730e+000.026327.03.77%995.62.11%motif file (matrix) svg
46 C A T G C T A G T C G A A C G T A C T G C G T A T A G C C G A T T G A C C G T A A G C T G A T C Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer1e-2-5.539e+000.031125.03.49%911.31.93%motif file (matrix) svg
47 C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer1e-2-5.509e+000.031413.01.82%360.40.76%motif file (matrix) svg
48 G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer1e-2-5.489e+000.031432.04.47%1266.42.68%motif file (matrix) svg
49 G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer1e-2-5.180e+000.041813.01.82%375.50.80%motif file (matrix) svg
50 G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer1e-2-5.148e+000.0423197.027.51%11039.723.39%motif file (matrix) svg
51 T G C A T C G A T A G C G T A C T C A G C T A G G T C A G C T A T C A G G A C T ETS(ETS)/Promoter/Homer1e-2-5.098e+000.043621.02.93%748.71.59%motif file (matrix) svg
52 C T G A T G C A T A G C T G A C T A C G T C A G C T G A G C T A T C A G G A C T ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer1e-2-4.768e+000.059531.04.33%1281.32.71%motif file (matrix) svg