Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
1 |
| Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer | 1e-266 | -6.134e+02 | 0.0000 | 262.0 | 36.59% | 787.8 | 1.67% | motif file (matrix) |
svg |
2 |
| USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer | 1e-231 | -5.336e+02 | 0.0000 | 282.0 | 39.39% | 1374.5 | 2.91% | motif file (matrix) |
svg |
3 |
| BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer | 1e-218 | -5.041e+02 | 0.0000 | 438.0 | 61.17% | 5459.1 | 11.57% | motif file (matrix) |
svg |
4 |
| MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer | 1e-212 | -4.900e+02 | 0.0000 | 317.0 | 44.27% | 2297.1 | 4.87% | motif file (matrix) |
svg |
5 |
| CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer | 1e-188 | -4.342e+02 | 0.0000 | 269.0 | 37.57% | 1739.5 | 3.69% | motif file (matrix) |
svg |
6 |
| NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer | 1e-130 | -3.007e+02 | 0.0000 | 278.0 | 38.83% | 3243.4 | 6.87% | motif file (matrix) |
svg |
7 |
| TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer | 1e-123 | -2.841e+02 | 0.0000 | 104.0 | 14.53% | 187.6 | 0.40% | motif file (matrix) |
svg |
8 |
| NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer | 1e-109 | -2.522e+02 | 0.0000 | 304.0 | 42.46% | 4838.9 | 10.25% | motif file (matrix) |
svg |
9 |
| bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer | 1e-77 | -1.793e+02 | 0.0000 | 129.0 | 18.02% | 966.2 | 2.05% | motif file (matrix) |
svg |
10 |
| Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer | 1e-74 | -1.724e+02 | 0.0000 | 168.0 | 23.46% | 1939.3 | 4.11% | motif file (matrix) |
svg |
11 |
| c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer | 1e-68 | -1.583e+02 | 0.0000 | 148.0 | 20.67% | 1606.6 | 3.40% | motif file (matrix) |
svg |
12 |
| n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer | 1e-68 | -1.571e+02 | 0.0000 | 172.0 | 24.02% | 2271.6 | 4.81% | motif file (matrix) |
svg |
13 |
| E-box(bHLH)/Promoter/Homer | 1e-62 | -1.431e+02 | 0.0000 | 68.0 | 9.50% | 231.8 | 0.49% | motif file (matrix) |
svg |
14 |
| c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer | 1e-38 | -8.808e+01 | 0.0000 | 110.0 | 15.36% | 1617.8 | 3.43% | motif file (matrix) |
svg |
15 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-34 | -7.900e+01 | 0.0000 | 47.0 | 6.56% | 251.8 | 0.53% | motif file (matrix) |
svg |
16 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-25 | -5.895e+01 | 0.0000 | 49.0 | 6.84% | 444.5 | 0.94% | motif file (matrix) |
svg |
17 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-17 | -4.030e+01 | 0.0000 | 37.0 | 5.17% | 386.5 | 0.82% | motif file (matrix) |
svg |
18 |
| COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer | 1e-8 | -2.064e+01 | 0.0000 | 120.0 | 16.76% | 4495.4 | 9.52% | motif file (matrix) |
svg |
19 |
| HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer | 1e-8 | -1.867e+01 | 0.0000 | 97.0 | 13.55% | 3486.7 | 7.39% | motif file (matrix) |
svg |
20 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-7 | -1.690e+01 | 0.0000 | 193.0 | 26.96% | 8840.0 | 18.73% | motif file (matrix) |
svg |
21 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-7 | -1.678e+01 | 0.0000 | 53.0 | 7.40% | 1539.4 | 3.26% | motif file (matrix) |
svg |
22 |
| E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-6 | -1.415e+01 | 0.0000 | 116.0 | 16.20% | 4851.4 | 10.28% | motif file (matrix) |
svg |
23 |
| CRE(bZIP)/Promoter/Homer | 1e-5 | -1.357e+01 | 0.0000 | 30.0 | 4.19% | 724.7 | 1.54% | motif file (matrix) |
svg |
24 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-5 | -1.276e+01 | 0.0000 | 143.0 | 19.97% | 6493.9 | 13.76% | motif file (matrix) |
svg |
25 |
| Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer | 1e-4 | -1.094e+01 | 0.0003 | 17.0 | 2.37% | 329.9 | 0.70% | motif file (matrix) |
svg |
26 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-4 | -1.091e+01 | 0.0003 | 184.0 | 25.70% | 9120.5 | 19.32% | motif file (matrix) |
svg |
27 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.450e+00 | 0.0011 | 19.0 | 2.65% | 447.6 | 0.95% | motif file (matrix) |
svg |
28 |
| PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer | 1e-4 | -9.238e+00 | 0.0013 | 56.0 | 7.82% | 2164.1 | 4.59% | motif file (matrix) |
svg |
29 |
| TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer | 1e-3 | -8.500e+00 | 0.0026 | 8.0 | 1.12% | 102.6 | 0.22% | motif file (matrix) |
svg |
30 |
| Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.785e+00 | 0.0050 | 38.0 | 5.31% | 1381.7 | 2.93% | motif file (matrix) |
svg |
31 |
| EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer | 1e-3 | -7.509e+00 | 0.0064 | 64.0 | 8.94% | 2749.1 | 5.82% | motif file (matrix) |
svg |
32 |
| OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer | 1e-3 | -7.454e+00 | 0.0066 | 9.0 | 1.26% | 150.3 | 0.32% | motif file (matrix) |
svg |
33 |
| NFY(CCAAT)/Promoter/Homer | 1e-3 | -7.256e+00 | 0.0078 | 45.0 | 6.28% | 1775.3 | 3.76% | motif file (matrix) |
svg |
34 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.062e+00 | 0.0092 | 41.0 | 5.73% | 1588.3 | 3.37% | motif file (matrix) |
svg |
35 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-2 | -6.884e+00 | 0.0107 | 21.0 | 2.93% | 640.1 | 1.36% | motif file (matrix) |
svg |
36 |
| Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer | 1e-2 | -6.835e+00 | 0.0109 | 175.0 | 24.44% | 9297.5 | 19.70% | motif file (matrix) |
svg |
37 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -6.813e+00 | 0.0109 | 3.0 | 0.42% | 13.1 | 0.03% | motif file (matrix) |
svg |
38 |
| HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer | 1e-2 | -6.661e+00 | 0.0123 | 22.0 | 3.07% | 697.5 | 1.48% | motif file (matrix) |
svg |
39 |
| Sp1(Zf)/Promoter/Homer | 1e-2 | -6.468e+00 | 0.0145 | 23.0 | 3.21% | 754.9 | 1.60% | motif file (matrix) |
svg |
40 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-2 | -6.391e+00 | 0.0153 | 29.0 | 4.05% | 1044.6 | 2.21% | motif file (matrix) |
svg |
41 |
| Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer | 1e-2 | -6.001e+00 | 0.0220 | 65.0 | 9.08% | 2983.4 | 6.32% | motif file (matrix) |
svg |
42 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-2 | -5.968e+00 | 0.0222 | 31.0 | 4.33% | 1175.3 | 2.49% | motif file (matrix) |
svg |
43 |
| Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer | 1e-2 | -5.940e+00 | 0.0223 | 107.0 | 14.94% | 5399.2 | 11.44% | motif file (matrix) |
svg |
44 |
| Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer | 1e-2 | -5.787e+00 | 0.0254 | 59.0 | 8.24% | 2678.2 | 5.67% | motif file (matrix) |
svg |
45 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-2 | -5.730e+00 | 0.0263 | 27.0 | 3.77% | 995.6 | 2.11% | motif file (matrix) |
svg |
46 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-2 | -5.539e+00 | 0.0311 | 25.0 | 3.49% | 911.3 | 1.93% | motif file (matrix) |
svg |
47 |
| Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer | 1e-2 | -5.509e+00 | 0.0314 | 13.0 | 1.82% | 360.4 | 0.76% | motif file (matrix) |
svg |
48 |
| Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer | 1e-2 | -5.489e+00 | 0.0314 | 32.0 | 4.47% | 1266.4 | 2.68% | motif file (matrix) |
svg |
49 |
| Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer | 1e-2 | -5.180e+00 | 0.0418 | 13.0 | 1.82% | 375.5 | 0.80% | motif file (matrix) |
svg |
50 |
| THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer | 1e-2 | -5.148e+00 | 0.0423 | 197.0 | 27.51% | 11039.7 | 23.39% | motif file (matrix) |
svg |
51 |
| ETS(ETS)/Promoter/Homer | 1e-2 | -5.098e+00 | 0.0436 | 21.0 | 2.93% | 748.7 | 1.59% | motif file (matrix) |
svg |
52 |
| ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer | 1e-2 | -4.768e+00 | 0.0595 | 31.0 | 4.33% | 1281.3 | 2.71% | motif file (matrix) |
svg |