Information for 7-GAGAGGAGGGCATTKC (Motif 8)

A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
Reverse Opposite:
T A C G G T C A G T C A C T G A C G A T A T C G A G T C A G T C G T A C C A G T A T G C A G T C A G C T A T G C A C G T A T G C
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.665
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.54%
Number of Background Sequences with motif44.0
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets55.6 +/- 29.6bp
Average Position of motif in Background47.8 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAGAGGAGGGCATTKC
NGTAGGTTGGCATNNN
 A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:2
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GAGAGGAGGGCATTKC
BTBRAGTGSN---------
 A C G T A C G T A C G T A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGAGGGCATTKC
CTTGAGTGGCT--------
 A C G T A C G T A C G T A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--GAGAGGAGGGCATTKC
TTGAGTGSTT--------
 A C G T A C G T A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GAGAGGAGGGCATTKC-
--AGGGAAGTCATTTCT
 A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C A C G T
A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GAGAGGAGGGCATTKC
----NGTGGGCAT---
 A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
A C G T A C G T A C G T A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GAGAGGAGGGCATTKC
----GGTTGGCAT---
 A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:GAGAGGAGGGCATTKC
GGGAGGACNG------
 A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGAGGGCATTKC
NNTNAGGGGCGGNNNN---
 A C G T A C G T A C G T A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---GAGAGGAGGGCATTKC
CTYRAGTGSY---------
 A C G T A C G T A C G T A T C G C G T A A T C G T C G A A C T G A T C G G T C A A C T G C T A G T C A G A T G C C G T A A G C T A C G T C A G T A T G C
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T