Information for 5-SAGCAGCATGCWCTGA (Motif 6)

A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
Reverse Opposite:
A G C T G T A C C G T A A T C G C G T A A C T G A G T C G T C A A C G T A C T G A G T C C A G T C T A G A G T C C A G T T A G C
p-value:1e-10
log p-value:-2.434e+01
Information Content per bp:1.757
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif7.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.6 +/- 23.9bp
Average Position of motif in Background63.0 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0207.1_Zic3_2/Jaspar

Match Rank:1
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:SAGCAGCATGCWCTGA--
---NNTCCTGCTGTGNNN
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:2
Score:0.53
Offset:6
Orientation:forward strand
Alignment:SAGCAGCATGCWCTGA
------CCTGCTGAGH
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:SAGCAGCATGCWCTGA
--ACCACATCCTGT--
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
A C G T A C G T T G C A A G T C A G T C C G T A A G T C C G T A A C G T A G T C A G T C C A G T A T C G A G C T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:SAGCAGCATGCWCTGA--
---TCNCCTGCTGNGNNN
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:forward strand
Alignment:SAGCAGCATGCWCTGA
-AGCCTCAGGCA----
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-SAGCAGCATGCWCTGA
ATTGCCTCAGGCAAT--
 A C G T A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
C G T A C A G T G C A T T C A G G A T C G T A C A C G T A T G C G T C A C T A G C A T G G T A C C T G A G T C A G C A T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:SAGCAGCATGCWCTGA--
---TNTCCTGCTGTGNNG
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A A C G T A C G T
A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0130.1_Gm397_2/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:SAGCAGCATGCWCTGA-
-AGCGGCACACACGCAA
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A A C G T
A C G T C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.51
Offset:1
Orientation:forward strand
Alignment:SAGCAGCATGCWCTGA
-AGCCTCAGGCA----
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:SAGCAGCATGCWCTGA
-CGCCTCAGGCA----
 A T C G G C T A A C T G A G T C G T C A C T A G A G T C C G T A A C G T T A C G A G T C C G A T A T G C C G A T A C T G C T G A
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T