Information for 12-VGRGCSGAGCCAG (Motif 16)

T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
Reverse Opposite:
G A T C A G C T C T A G A C T G A T G C A G C T A T G C A T G C A C T G A T G C A G C T A T G C A T C G
p-value:1e-8
log p-value:-1.960e+01
Information Content per bp:1.644
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.35%
Number of Background Sequences with motif358.3
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets59.4 +/- 27.9bp
Average Position of motif in Background47.7 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-VGRGCSGAGCCAG
GGGGGCGGGGCC--
 A C G T T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:VGRGCSGAGCCAG
----CGGAGC---
 T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--VGRGCSGAGCCAG
RGKGGGCGGAGC---
 A C G T A C G T T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.64
Offset:6
Orientation:forward strand
Alignment:VGRGCSGAGCCAG
------CAGCC--
 T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-VGRGCSGAGCCAG
GGGGCCGAGGCCTG
 A C G T T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.62
Offset:3
Orientation:forward strand
Alignment:VGRGCSGAGCCAG
---AGCGCGCC--
 T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
A C G T A C G T A C G T T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---VGRGCSGAGCCAG
NNVDGGGYGGGGCYN-
 A C G T A C G T A C G T T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--VGRGCSGAGCCAG
AGGGGGCGGGGCTG-
 A C G T A C G T T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T

NFIX/MA0671.1/Jaspar

Match Rank:9
Score:0.60
Offset:5
Orientation:forward strand
Alignment:VGRGCSGAGCCAG-
-----CGTGCCAAG
 T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:VGRGCSGAGCCAG
GAGSCCGAGC---
 T A G C A T C G T C G A A T C G A G T C T A C G T A C G T C G A A T C G A G T C A G T C T C G A C T A G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T