Information for 6-GTGTCTGCACYYC (Motif 9)

A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
Reverse Opposite:
A T C G C T A G T C G A T C A G C A G T A C T G T G A C G C T A T C A G C T G A G T A C C T G A T G A C
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.603
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.4 +/- 19.8bp
Average Position of motif in Background64.3 +/- 11.8bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GTGTCTGCACYYC
VBSYGTCTGG-----
 A C G T A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----GTGTCTGCACYYC
NNGCGTGTGTGCNGCN-
 A C G T A C G T A C G T A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GTGTCTGCACYYC
CTGTCTGG-----
 A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCTGCACYYC
TGAGTCAGCA----
 A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGTCTGCACYYC
TWGTCTGV-----
 A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCTGCACYYC--
NNGTATGTGCACATNNN
 A C G T A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCTGCACYYC---
NSTGTTTRCWCAGBNNN
 A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G

PB0104.1_Zscan4_1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCTGCACYYC--
NTNTATGTGCACATNNN
 A C G T A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GTGTCTGCACYYC
GGGATTGCATNN-
 A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GTGTCTGCACYYC
SCTGTCARCACC--
 A C G T A C T G G A C T A C T G G A C T A G T C C G A T A C T G A G T C G T C A A G T C A G C T G A T C A T G C
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T