Information for 1-CCAGCTCCCTCCC (Motif 1)

A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
Reverse Opposite:
A T C G A C T G C T A G C G T A T A C G A C T G C T A G C G T A A C T G A G T C G C A T A C T G C T A G
p-value:1e-20
log p-value:-4.673e+01
Information Content per bp:1.878
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif29.2
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets57.7 +/- 21.5bp
Average Position of motif in Background49.2 +/- 32.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:CCAGCTCCCTCCC
---GGTCCCGCCC
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

POL013.1_MED-1/Jaspar

Match Rank:2
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCAGCTCCCTCCC
---GCTCCG----
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCAGCTCCCTCCC
--NCTTCCCGCCC
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCAGCTCCCTCCC
-CAGCTGTTTCCT
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
A C G T G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CCAGCTCCCTCCC--
----GCCCCGCCCCC
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CCAGCTCCCTCCC--
---KGCCCTTCCCCA
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

SP2/MA0516.1/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTCCCTCCC
GCCCCGCCCCCTCCC
 A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCAGCTCCCTCCC
TGCAGCTGTCCCT-
 A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T A C G T

EGR1/MA0162.2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCAGCTCCCTCCC
CCCCCGCCCCCGCC-
 A C G T A C G T A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCAGCTCCCTCCC--
---GCTCCGCCCMCY
 A G T C A G T C C G T A C T A G A G T C A C G T A G T C G T A C A G T C A C G T A G T C A G T C A T G C A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T