Information for 4-CCCCTGGCTGTGT (Motif 6)

A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
T C G A A G T C C G T A A G T C C G T A A C T G A G T C A T G C C G T A A C T G A C T G A C T G A C T G
p-value:1e-10
log p-value:-2.520e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.2 +/- 27.0bp
Average Position of motif in Background41.6 +/- 18.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZIC1/MA0696.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGCTGTGT
GACCCCCCGCTGTG-
 A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGCTGTGT
GACCCCCCGCTGCGC
 A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC4/MA0751.1/Jaspar

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGCTGTGT
GACCCCCCGCTGTGC
 A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCCCTGGCTGTGT
CCCCCTGCTGTG-
 A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCCTGGCTGTGT
GGCCYCCTGCTGDGH
 A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

INSM1/MA0155.1/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTGGCTGTGT
CGCCCCCTGACA----
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCCTGGCTGTGT--
---NTGGGTGTGGCC
 A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCCCTGGCTGTGT
------GCTGTG-
 A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CCCCTGGCTGTGT-
----TGGGTGTGGC
 A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCCCTGGCTGTGT--
TCNCCTGCTGNGNNN
 A G T C A G T C A G T C A G T C A C G T A T C G A C T G G T A C A C G T A C T G A C G T A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G