Information for 1-CAVAGCCACTTBCACC (Motif 3)

A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C
Reverse Opposite:
C T A G A C T G A C G T C T A G T C G A C T G A C G T A A C T G A C G T A C T G A T C G A G T C A C G T A G C T A C G T A C T G
p-value:1e-11
log p-value:-2.745e+01
Information Content per bp:1.833
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.1 +/- 25.6bp
Average Position of motif in Background40.2 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:1
Score:0.67
Offset:4
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC
----GCCACRCCCACY
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C
A C G T A C G T A C G T A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC
----GCCACACCCA--
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C
A C G T A C G T A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC-
-TAAGCCACTTGAATTT
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C A C G T
A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC-
-TAAGCCACTTGAAATT
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C A C G T
A C G T A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

SP8/MA0747.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC
----GCCACGCCCACT
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C
A C G T A C G T A C G T A C G T T C A G G T A C G T A C G T C A G T A C A C T G T A G C T A G C A G T C T G C A A G T C G A C T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:6
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:CAVAGCCACTTBCACC
---GGCCACACCCAN-
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C
A C G T A C G T A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC-
-TAAGCCACTTAACATT
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC-
-TAAGCCACTTGAAATT
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C A C G T
A C G T G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

SP4/MA0685.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC--
-TAAGCCACGCCCCCTTT
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C A C G T A C G T
A C G T A G C T G C T A C T G A C T A G G T A C A G T C T G C A G T A C A C T G T A G C T G A C A G T C G T A C G A T C G C A T G A C T G A C T

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CAVAGCCACTTBCACC
---GGCCACACCCA--
 A G T C G T C A T C G A C G T A A C T G A T G C A G T C C G T A A G T C C G A T A G C T A C G T A G T C C G T A A G T C A G T C
A C G T A C G T A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C G T A C G T