Information for 11-TGCTATTTGCGTG (Motif 23)

A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G
Reverse Opposite:
A G T C C G T A A G T C A C T G A G T C C G T A C G T A C T G A A G C T C T G A A C T G A G T C C G T A
p-value:1e-4
log p-value:-1.077e+01
Information Content per bp:1.931
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.37%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.8 +/- 25.6bp
Average Position of motif in Background54.5 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:1
Score:0.70
Offset:6
Orientation:reverse strand
Alignment:TGCTATTTGCGTG---
------TTGCGTGCVA
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.65
Offset:7
Orientation:forward strand
Alignment:TGCTATTTGCGTG
-------TGCGTG
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:TGCTATTTGCGTG-
----ATTTGCATAA
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TGCTATTTGCGTG-
----ATTTGCATAT
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

POU2F2/MA0507.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCTATTTGCGTG-
-TTCATTTGCATAT
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T
A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TGCTATTTGCGTG
----ATTTGCATA
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G
A C G T A C G T A C G T A C G T G C T A G C A T G C A T G C A T T C A G G T A C T C G A G C A T C T G A

Pou2f3/MA0627.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTATTTGCGTG---
TNTAATTTGCATACNA
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0145.1_Pou2f3/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTATTTGCGTG---
TNTAATTTGCATACNA
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T G A T C C A G T T G C A G C T A C G A T G C A T C G A T C T A G G T A C C T G A C G A T C T G A G T A C C G T A T C G A

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TGCTATTTGCGTG---
TNTAATTTGCATANNN
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C G T A C G T
A C G T G A T C C A G T G T C A G C T A C G A T G C A T C G A T T C A G G T A C C T G A C G A T C G T A G T A C C G T A T C G A

POU2F1/MA0785.1/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:TGCTATTTGCGTG--
---AATTTGCATANT
 A C G T A C T G A G T C G A C T C T G A A G C T A C G T A C G T A C T G A G T C C T A G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T G T C A G C T A G C A T G A C T G C A T T C A G G T A C T C G A G C A T C T G A G C A T C G A T