p-value: | 1e-12 |
log p-value: | -2.860e+01 |
Information Content per bp: | 1.652 |
Number of Target Sequences with motif | 129.0 |
Percentage of Target Sequences with motif | 15.75% |
Number of Background Sequences with motif | 3904.4 |
Percentage of Background Sequences with motif | 8.08% |
Average Position of motif in Targets | 53.8 +/- 25.4bp |
Average Position of motif in Background | 50.6 +/- 29.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.2 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer
Match Rank: | 1 |
Score: | 0.72 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG- ---TTGCCAAG |
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NFATC2/MA0152.1/Jaspar
Match Rank: | 2 |
Score: | 0.69 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG --TTTTCCA- |
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NFIX/MA0671.1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG- --CGTGCCAAG |
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NFIC/MA0161.1/Jaspar
Match Rank: | 4 |
Score: | 0.67 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GCTTTGCCAG ----TGCCAA |
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Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer
Match Rank: | 5 |
Score: | 0.66 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG- -HTTTCCCASG |
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NFAT5/MA0606.1/Jaspar
Match Rank: | 6 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG- -ATTTTCCATT |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 7 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG- ---TTGACAGC |
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NFIA/MA0670.1/Jaspar
Match Rank: | 8 |
Score: | 0.63 |
Offset: | 2 |
Orientation: | forward strand |
Alignment: | GCTTTGCCAG-- --GGTGCCAAGT |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 9 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GCTTTGCCAG--- ---ATGCCAGACN |
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PH0170.1_Tgif2/Jaspar
Match Rank: | 10 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GCTTTGCCAG------ GTATTGACAGCTNNTT |
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