Information for 6-GGCTGAAAAA (Motif 11)

C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A
Reverse Opposite:
A G C T A C G T A G C T A G C T A G C T A G T C C G T A A C T G T A G C G T A C
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.835
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.44%
Number of Background Sequences with motif223.8
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets50.7 +/- 24.0bp
Average Position of motif in Background49.0 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:GGCTGAAAAA
---TGGAAAA
 C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGCTGAAAAA
TGCTGACTCA
 C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGCTGAAAAA
NGCTN-----
 C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T

SA0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGAAAAA---------
NNCCTGNAAAAAAAAAAAAA
 A C G T C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G C T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A T C G A T C G A T C G A C T G A C T G A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GGCTGAAAAA---
TACTGGAAAAAAAA
 A C G T C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGCTGAAAAA-
-NATGGAAAAN
 C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCTGAAAAA---
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

SA0002.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGAAAAA---------
NNCCTGNAAAAAAAAAAAAA
 A C G T C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A C G T A A G T C A G T C A C G T C T A G C T G A C T G A C T G A C T G A C T G A T C G A T C G A T C G A T C G A C T G A C T G A C T G A T C G A C T G A

Rhox11/MA0629.1/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCTGAAAAA---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCTGAAAAA---
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T C A T G A T C G A G T C C G A T A C T G C T G A C T G A T C G A G T C A T C G A A C G T A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A